Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3294 A06 995857 9e-91
RSS0488 A06 1005787 1e-116
RSS3749 A06 1017550 4e-87
RSS1198 A06 1044856 2e-35
RSS2420 A06 1126850 1e-100
RSS1648 A06 1329616 2e-61
RSS1121 A06 1329658 4e-52
RSS3586 A06 1457746 1e-124
RSS0850 A06 1532069 2e-80
RSS0419 A06 1576147 1e-100
RSS0843 A06 1606608 1e-133
RSS2798 A06 1660154 1e-133
RSS1051 A06 1752668 4e-89
RSS0982 A06 1904524 1e-120
RSS1568 A06 1917649 1e-115
RSS3100 A06 2060548 3e-73
RSS2424 A06 2121939 8e-29
RSS3882 A06 2178206 1e-56
RSS2328 A06 2229278 7e-64
RSS3974 A06 2256818 2e-99
RSS2837 A06 2274124 2e-59
RSS0387 A06 2298632 2e-87
RSS3318 A06 2573488 7e-95
RSS1023 A06 2575661 1e-120
RSS3674 A06 2821368 2e-82
RSS2558 A06 2857597 1e-105
RSS3590 A06 2881970 2e-76
RSS2005 A06 2891530 1e-101
RSS3861 A06 2937807 3e-96
RSS1093 A06 2963497 5e-70
RSS1964 A06 2990684 1e-60
RSS3932 A06 3008253 5e-71
RSS3040 A06 3088650 2e-61
RSS2592 A06 3092318 1e-124
RSS3377 A06 3109672 1e-46
RSS0223 A06 3109820 7e-12
RSS2909 A06 3163365 4e-71
RSS0302 A06 3184632 2e-97
RSS1729 A06 3315350 1e-49
RSS0730 A06 3389927 8e-97
RSS3483 A06 3504470 1e-112
RSS2226 A06 3504503 7e-90
RSS3075 A06 3605003 2e-78
RSS0438 A06 3622077 2e-74
RSS1644 A06 3766807 2e-44
RSS1778 A06 3810121 5e-28
RSS3654 A06 3835094 1e-40
RSS3336 A06 3837032 1e-110
RSS1432 A06 3863226 1e-82
RSS3872 A06 3867980 1e-100
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus