Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0938 A06 5692720 1e-119 LG9 56.1
RSS3778 A06 5783486 9e-42 LG9 55.7
RSS3349 A06 5784372 1e-130
RSS0697 A06 5829217 9e-93
RSS3880 A06 5872598 1e-107
RSS0290 A06 5920181 3e-63
RSS3547 A06 5920337 2e-76
RSS2777 A06 6023148 5e-75
RSS2378 A06 6029926 1e-118 LG7 19.6
RSS0177 A06 6043537 1e-108
RSS1223 A06 6152796 1e-133
RSS3031 A06 6198120 1e-110
RSS1867 A06 6221115 2e-78
RSS2494 A06 6370048 2e-30 LG9 5.0
RSS3402 A06 6371586 1e-21 LG9 5.0
RSS3235 A06 6426421 1e-78
RSS3751 A06 6457735 3e-82
RSS0366 A06 6595086 1e-111
RSS1397 A06 6609658 6e-21
RSS2265 A06 6629792 6e-91
RSS3918 A06 6666279 1e-112
RSS3447 A06 6716782 2e-82
RSS0890 A06 6719954 3e-61
RSS4006 A06 6738934 9e-91
RSS2998 A06 6753045 1e-95
RSS2882 A06 6786733 1e-21
RSS2434 A06 6870284 1e-55 LG7 22.2
RSS1398 A06 6942308 3e-42
RSS1364 A06 6979218 2e-17
RSS3884 A06 7090600 2e-36
RSS3733 A06 7108150 6e-73
RSS0437 A06 7138437 3e-87
RSS0099 A06 7165470 1e-78
RSS0492 A06 7435974 3e-86
RSS2707 A06 7554804 3e-41
RSS0132 A06 7557100 3e-61
RSS0434 A06 7560324 5e-93
RSS1346 A06 7560333 1e-108
RSS2255 A06 7586371 9e-78
RSS1961 A06 7600028 1e-47
RSS0038 A06 7658768 1e-39
RSS0907 A06 7664103 2e-75
RSS2038 A06 7692935 2e-38
RSS2214 A06 7699241 2e-23
RSS3050 A06 7774564 1e-116
RSS1990 A06 7841158 1e-120
RSS2710 A06 8043786 9e-89
RSS2262 A06 8067132 1e-119
RSS1811 A06 8092771 3e-54 LG9 47.4
RSS0726 A06 8222421 1e-61
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466


MarkerDB | Raphanus sativus