Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0387 A06 2298632 2e-87
RSS0392 A06 16430995 1e-126
RSS0396 A06 22583958 1e-105 LG4 96.1
RSS0399 A06 16408783 1e-131
RSS0419 A06 1576147 1e-100
RSS0430 A06 1575948 1e-123 LG9 9.7
RSS0430_a A06 1575948 1e-123 LG3 104.1
RSS0434 A06 7560324 5e-93
RSS0435 A06 25579589 1e-126
RSS0437 A06 7138437 3e-87
RSS0438 A06 3622077 2e-74
RSS0439 A06 26250495 1e-113
RSS0456 A06 8615877 4e-98
RSS0460 A06 19106561 1e-112
RSS0471 A06 995309 5e-51 LG9 7.8
RSS0474 A06 11840139 2e-92
RSS0485 A06 1751819 1e-129 LG3 104.4
RSS0488 A06 1005787 1e-116
RSS0492 A06 7435974 3e-86
RSS0497 A06 14411628 2e-70
RSS0513 A06 18472419 1e-84
RSS0521 A06 21866370 2e-65
RSS0527 A06 9295630 5e-34
RSS0555 A06 8523859 4e-60
RSS0561 A06 9772896 1e-118
RSS0570 A06 25498029 4e-61
RSS0584 A06 18286800 3e-99
RSS0608 A06 17399397 1e-122
RSS0609 A06 896283 2e-94 LG3 107.6
RSS0616 A06 10127286 1e-103
RSS0627 A06 5569831 1e-40
RSS0640 A06 14319151 8e-46 LG3 122.8
RSS0642 A06 9497556 1e-58
RSS0643 A06 11395304 1e-120
RSS0648 A06 21276205 1e-103
RSS0650 A06 10114874 5e-34
RSS0651 A06 19385250 2e-77
RSS0660 A06 19405846 4e-34 LG2 96.9
RSS0697 A06 5829217 9e-93
RSS0704 A06 803385 1e-122
RSS0726 A06 8222421 1e-61
RSS0730 A06 3389927 8e-97
RSS0752 A06 14646119 7e-56
RSS0760 A06 22998086 3e-86 LG7 94.2
RSS0766 A06 17162818 1e-82
RSS0771 A06 17834775 3e-95
RSS0773 A06 8222653 1e-32
RSS0803 A06 14521048 1e-118
RSS0812 A06 22772593 2e-74
RSS0827 A06 10448468 1e-91
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

MarkerDB | Raphanus sativus