Radish Marker Database

B. rapa genome (v1.2) list : A06

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 466

Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3872 A06 3867980 1e-100
RSS3880 A06 5872598 1e-107
RSS3882 A06 2178206 1e-56
RSS3884 A06 7090600 2e-36
RSS3898 A06 15439986 2e-53
RSS3908 A06 21046771 8e-04
RSS3918 A06 6666279 1e-112
RSS3919 A06 18130281 3e-04 LG4 75.6
RSS3921 A06 8733921 4e-93
RSS3932 A06 3008253 5e-71
RSS3954 A06 16849590 5e-44
RSS3974 A06 2256818 2e-99
RSS3983 A06 24724095 8e-94
RSS4006 A06 6738934 9e-91
RSS4007 A06 10661172 1e-111
RSS4009 A06 5096297 1e-95
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 466

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