Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0002 A05 21517278 1e-105
RSS0007 A05 21509896 1e-113
RSS0012 A05 776143 1e-52
RSS0021 A05 6309841 5e-85
RSS0025 A05 14129829 1e-61
RSS0063 A05 22522819 1e-104
RSS0084 A05 21932276 7e-76 LG3 15.0
RSS0089 A05 21337418 2e-48
RSS0094 A05 22866945 1e-104
RSS0109 A05 11034 1e-85
RSS0112 A05 8188152 4e-79
RSS0113 A05 22540883 8e-98
RSS0121 A05 4160687 7e-88
RSS0138 A05 19148951 3e-58
RSS0151 A05 23453181 3e-53
RSS0166 A05 2561979 3e-82 LG2 148.6
RSS0169 A05 16904163 1e-102
RSS0171 A05 5351810 1e-105 LG2 135.4
RSS0196 A05 1577759 2e-66
RSS0209 A05 22316010 1e-127
RSS0222 A05 14892962 1e-113
RSS0230 A05 10422824 1e-107
RSS0231 A05 21059332 3e-83
RSS0235 A05 23652713 1e-100
RSS0238 A05 16752151 1e-115
RSS0242 A05 15832797 3e-83
RSS0252 A05 3394449 1e-91
RSS0258 A05 20822120 1e-139 LG3 23.1
RSS0273 A05 17426599 4e-60
RSS0281 A05 12816914 1e-105
RSS0292 A05 23781817 1e-107 LG3 146.8
RSS0292_a A05 23781817 1e-107 LG3 0.0
RSS0315 A05 6290603 3e-82
RSS0341 A05 3075101 9e-62 LG4 47.8
RSS0358 A05 8229846 2e-55
RSS0361 A05 23459399 1e-45 LG3 4.0
RSS0400 A05 1181022 5e-95
RSS0402 A05 2477673 3e-58
RSS0408 A05 2349168 9e-94
RSS0411 A05 21786725 5e-97
RSS0429 A05 6968188 7e-35
RSS0431 A05 17455022 1e-120
RSS0443 A05 8928140 8e-82
RSS0454 A05 3231694 1e-58 LG2 140.6
RSS0491 A05 18805073 5e-78 LG3 35.4
RSS0496 A05 20600900 3e-66 LG9 0.0
RSS0499 A05 2470902 1e-135
RSS0504 A05 10782861 2e-55
RSS0508 A05 19021068 2e-18
RSS0519 A05 14475581 1e-105
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus