Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1809 A05 23673302 6e-08 LG1 59.9
RSS2731 A05 7277999 1e-47 LG1 107.5
RSS0750 A05 23624181 4e-22 LG2 3.5
RSS2505 A05 21264179 3e-84 LG2 11.3
RSS2960 A05 9982347 2e-51 LG2 80.8
RSS1288 A05 7792747 1e-84 LG2 128.3
RSS2586 A05 7497076 1e-108 LG2 130.1
RSS1469 A05 6527724 2e-65 LG2 132.1
RSS2868 A05 6133254 2e-68 LG2 132.7
RSS1400 A05 6533206 9e-83 LG2 133.1
RSS1670 A05 6878750 1e-102 LG2 133.4
RSS0942 A05 5860586 6e-97 LG2 134.2
RSS1084 A05 5997348 1e-101 LG2 134.2
RSS2362 A05 5925430 6e-71 LG2 134.6
RSS0171 A05 5351810 1e-105 LG2 135.4
RSS1190 A05 4694012 2e-65 LG2 136.6
RSS1193 A05 3909016 3e-30 LG2 139.2
RSS0454 A05 3231694 1e-58 LG2 140.6
RSS3153 A05 2856013 3e-50 LG2 141.8
RSS2532 A05 1804077 3e-73 LG2 147.2
RSS1754 A05 1823259 3e-45 LG2 147.2
RSS2756 A05 1863280 3e-51 LG2 147.2
RSS3095 A05 2002879 6e-16 LG2 147.2
RSS0166 A05 2561979 3e-82 LG2 148.6
RSS0292_a A05 23781817 1e-107 LG3 0.0
RSS0361 A05 23459399 1e-45 LG3 4.0
RSS1361 A05 23037408 4e-74 LG3 8.5
RSS1242 A05 22588649 1e-103 LG3 13.3
RSS1903 A05 22351832 2e-46 LG3 14.1
RSS0084 A05 21932276 7e-76 LG3 15.0
RSS2040 A05 21697698 1e-103 LG3 17.8
RSS3828 A05 21262787 8e-65 LG3 21.0
RSS1153 A05 21116660 3e-81 LG3 21.2
RSS0258 A05 20822120 1e-139 LG3 23.1
RSS1697 A05 20285111 1e-112 LG3 26.9
RSS3895 A05 20493369 2e-83 LG3 27.7
RSS1719 A05 20169297 1e-115 LG3 29.0
RSS0599 A05 19535652 1e-86 LG3 32.3
RSS0794 A05 18422242 1e-88 LG3 33.8
RSS0607 A05 18870519 1e-110 LG3 35.3
RSS0491 A05 18805073 5e-78 LG3 35.4
RSS3562 A05 18324992 1e-73 LG3 36.2
RSS3878 A05 18196423 1e-115 LG3 36.4
RSS2461 A05 18312950 5e-52 LG3 36.4
RSS1610 A05 17706863 2e-66 LG3 37.3
RSS1437 A05 17207954 4e-56 LG3 40.4
RSS0799 A05 16752151 1e-103 LG3 41.0
RSS1657 A05 16470274 1e-97 LG3 41.3
RSS0835 A05 16089702 3e-87 LG3 42.4
RSS2080 A05 15534753 2e-59 LG3 43.5
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367


MarkerDB | Raphanus sativus