Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3400 A05 10358560 8e-08
RSS3436 A05 15763099 3e-83
RSS3453 A05 16265276 6e-89 LG3 47.1
RSS3467 A05 7293558 4e-41
RSS3480 A05 11148449 2e-75
RSS3491 A05 1308381 7e-40
RSS3499 A05 19498522 9e-69
RSS3502 A05 19714500 2e-79
RSS3506 A05 20627847 2e-90
RSS3512 A05 7144153 2e-55
RSS3521 A05 142782 1e-137
RSS3527 A05 7294095 3e-73
RSS3541 A05 3084437 1e-101
RSS3551 A05 17424374 3e-75
RSS3552 A05 9082572 1e-120
RSS3556 A05 21860815 4e-95
RSS3562 A05 18324992 1e-73 LG3 36.2
RSS3568 A05 3496946 6e-73
RSS3570 A05 6000979 1e-88
RSS3574 A05 618982 1e-117
RSS3579 A05 1998948 1e-26
RSS3594 A05 21104936 1e-119
RSS3595 A05 5067286 8e-80
RSS3596 A05 15777371 0.047
RSS3599 A05 13166711 1e-130
RSS3605 A05 22302164 1e-100
RSS3661 A05 1814826 7e-77
RSS3715 A05 500702 1e-55
RSS3734 A05 7812177 5e-85
RSS3746 A05 22240360 1e-111
RSS3759 A05 22787322 4e-55
RSS3761 A05 1893143 2e-48
RSS3765 A05 7426674 1e-124
RSS3777 A05 6972423 2e-19
RSS3781 A05 1347355 1e-60
RSS3797 A05 17455022 1e-107
RSS3807 A05 1304864 5e-47
RSS3812 A05 2100048 4e-98
RSS3815 A05 4265194 1e-32
RSS3819 A05 19416283 1e-50
RSS3827 A05 17083595 2e-27 LG8 13.8
RSS3828 A05 21262787 8e-65 LG3 21.0
RSS3837 A05 9382732 1e-93
RSS3855 A05 5178734 1e-50
RSS3857 A05 12072451 0.88
RSS3876 A05 9982410 2e-83
RSS3878 A05 18196423 1e-115 LG3 36.4
RSS3895 A05 20493369 2e-83 LG3 27.7
RSS3901 A05 7226875 1e-114
RSS3902 A05 13662546 1e-107
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus