Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2772 A05 12225537 1e-27
RSS2778 A05 23670296 1e-140
RSS2786 A05 1601890 9e-51
RSS2794 A05 23555275 7e-34
RSS2797 A05 13086216 1e-71
RSS2802 A05 19932239 1e-72
RSS2822 A05 22135518 1e-101
RSS2823 A05 8122030 1e-72
RSS2862 A05 992746 2e-67
RSS2868 A05 6133254 2e-68 LG2 132.7
RSS2878 A05 7468725 2e-81
RSS2892 A05 22159041 1e-104
RSS2895 A05 700182 4e-41
RSS2902 A05 745992 6e-70
RSS2933 A05 20689222 1e-122
RSS2938 A05 18443732 1e-100
RSS2941 A05 12597074 1e-117
RSS2960 A05 9982347 2e-51 LG2 80.8
RSS2962 A05 15812859 1e-90
RSS2963 A05 7963672 1e-118
RSS2975 A05 16997954 2e-92
RSS3020 A05 2896496 3e-57
RSS3037 A05 19967120 1e-137
RSS3042 A05 21866359 3e-74
RSS3052 A05 21399460 1e-112
RSS3072 A05 13131541 4e-60 LG3 101.7
RSS3087 A05 10143010 6e-34
RSS3095 A05 2002879 6e-16 LG2 147.2
RSS3098 A05 19777695 3e-54
RSS3106 A05 19554674 1e-173
RSS3119 A05 16866082 2e-98
RSS3122 A05 6531751 1e-104
RSS3126 A05 17893833 6e-62
RSS3128 A05 23400682 4e-67
RSS3139 A05 17243847 3e-49
RSS3152 A05 20762661 9e-98
RSS3153 A05 2856013 3e-50 LG2 141.8
RSS3161 A05 23931332 1e-102
RSS3190 A05 23389658 6e-65
RSS3195 A05 6549734 0.036
RSS3198 A05 5229729 3e-96
RSS3212 A05 22280287 1e-107
RSS3215 A05 3685648 3e-43
RSS3216 A05 5368891 1e-21
RSS3265 A05 8133297 2e-52
RSS3289 A05 5085466 7e-78
RSS3291 A05 8729160 1e-36
RSS3328 A05 20276715 1e-59 LG3 56.3
RSS3332 A05 23010805 2e-36
RSS3348 A05 23853474 2e-60
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367


MarkerDB | Raphanus sativus