Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2269 A05 1515452 4e-94
RSS2279 A05 12349257 8e-18
RSS2284 A05 907314 1e-121
RSS2315 A05 23639837 1e-123
RSS2323 A05 22017023 1e-101
RSS2346 A05 18684962 2e-83
RSS2362 A05 5925430 6e-71 LG2 134.6
RSS2365 A05 18859158 2e-14
RSS2371 A05 3775651 2e-39
RSS2372 A05 10932018 5e-97
RSS2379 A05 18672338 1e-101
RSS2392 A05 21714140 8e-86
RSS2395 A05 3241777 1e-107
RSS2396 A05 12271341 2e-99
RSS2418 A05 17961473 7e-83
RSS2461 A05 18312950 5e-52 LG3 36.4
RSS2465 A05 153955 1e-82
RSS2468 A05 5662321 6e-49 LG8 41.8
RSS2471 A05 8983790 1e-109
RSS2472 A05 23638737 1e-102
RSS2482 A05 18008846 6e-47
RSS2484 A05 7033687 3e-36
RSS2485 A05 5768814 7e-94
RSS2486 A05 17273101 1e-99
RSS2498 A05 6968618 1e-123
RSS2505 A05 21264179 3e-84 LG2 11.3
RSS2511 A05 22309074 3e-24
RSS2529 A05 21090119 6e-57
RSS2532 A05 1804077 3e-73 LG2 147.2
RSS2547 A05 1432547 1e-121
RSS2554 A05 22018441 1e-100
RSS2560 A05 13353226 4e-09
RSS2567 A05 14876411 4e-95
RSS2573 A05 15766873 5e-82
RSS2577 A05 8208454 4e-77
RSS2586 A05 7497076 1e-108 LG2 130.1
RSS2587 A05 22302914 1e-134
RSS2623 A05 1657562 2e-72
RSS2624 A05 3873611 2e-83
RSS2650 A05 355517 1e-108
RSS2651 A05 23574198 8e-39
RSS2660 A05 10622426 2e-88 LG3 107.7
RSS2671 A05 291441 1e-105
RSS2675 A05 6250881 2e-69 LG8 44.8
RSS2679 A05 8188152 3e-77 LG3 73.6
RSS2691 A05 13458853 1e-110
RSS2731 A05 7277999 1e-47 LG1 107.5
RSS2754 A05 360859 1e-129
RSS2756 A05 1863280 3e-51 LG2 147.2
RSS2758 A05 5367245 2e-36
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus