Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS4008 A05 5332721 8e-26
RSS2758 A05 5367245 2e-36
RSS3216 A05 5368891 1e-21
RSS1429 A05 5409153 3e-83
RSS0539 A05 5653442 6e-96
RSS2485 A05 5768814 7e-94
RSS1934 A05 5808232 2e-33
RSS2159 A05 5855610 9e-74
RSS3570 A05 6000979 1e-88
RSS1112 A05 6000997 4e-83
RSS0315 A05 6290603 3e-82
RSS1780 A05 6306091 2e-27
RSS0021 A05 6309841 5e-85
RSS3122 A05 6531751 1e-104
RSS3195 A05 6549734 0.036
RSS1530 A05 6587365 2e-55
RSS1949 A05 6655376 1e-95
RSS1720 A05 6655376 8e-79
RSS0429 A05 6968188 7e-35
RSS2498 A05 6968618 1e-123
RSS3777 A05 6972423 2e-19
RSS1821 A05 6984827 2e-24
RSS2484 A05 7033687 3e-36
RSS3512 A05 7144153 2e-55
RSS3901 A05 7226875 1e-114
RSS3467 A05 7293558 4e-41
RSS3527 A05 7294095 3e-73
RSS1580 A05 7350237 1e-133
RSS1839 A05 7351075 3e-46
RSS2103 A05 7373555 3e-63
RSS1898 A05 7394189 2e-48
RSS3765 A05 7426674 1e-124
RSS2878 A05 7468725 2e-81
RSS0973 A05 7585372 1e-114
RSS3734 A05 7812177 5e-85
RSS2963 A05 7963672 1e-118
RSS2823 A05 8122030 1e-72
RSS3265 A05 8133297 2e-52
RSS0112 A05 8188152 4e-79
RSS2577 A05 8208454 4e-77
RSS0358 A05 8229846 2e-55
RSS0701 A05 8438365 1e-107
RSS3291 A05 8729160 1e-36
RSS0443 A05 8928140 8e-82
RSS2471 A05 8983790 1e-109
RSS3552 A05 9082572 1e-120
RSS1156 A05 9234297 1e-110
RSS3837 A05 9382732 1e-93
RSS3876 A05 9982410 2e-83
RSS1862 A05 10018486 2e-72
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus