Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1094 A05 4613936 6e-71
RSS1111 A05 22168667 3e-41
RSS1112 A05 6000997 4e-83
RSS1115 A05 23894219 5e-76
RSS1153 A05 21116660 3e-81 LG3 21.2
RSS1156 A05 9234297 1e-110
RSS1190 A05 4694012 2e-65 LG2 136.6
RSS1193 A05 3909016 3e-30 LG2 139.2
RSS1205 A05 21162662 0.051
RSS1216 A05 1718899 3e-74
RSS1218 A05 4042197 1e-100
RSS1236 A05 3867989 8e-38
RSS1240 A05 612023 1e-94
RSS1242 A05 22588649 1e-103 LG3 13.3
RSS1266 A05 1998161 1e-67
RSS1268 A05 22001653 1e-105
RSS1279 A05 2869949 1e-101
RSS1281 A05 19571846 1e-138
RSS1288 A05 7792747 1e-84 LG2 128.3
RSS1289 A05 2302760 1e-128
RSS1317 A05 3400454 2e-61
RSS1342 A05 18013917 5e-93
RSS1360 A05 22664629 9e-55
RSS1361 A05 23037408 4e-74 LG3 8.5
RSS1400 A05 6533206 9e-83 LG2 133.1
RSS1404 A05 911382 2e-31
RSS1429 A05 5409153 3e-83
RSS1437 A05 17207954 4e-56 LG3 40.4
RSS1447 A05 10630404 1e-79
RSS1451 A05 21111973 3e-09
RSS1469 A05 6527724 2e-65 LG2 132.1
RSS1491 A05 11944831 3e-64
RSS1495 A05 2981288 1e-104
RSS1497 A05 23887790 4e-82
RSS1527 A05 16259325 1e-108
RSS1530 A05 6587365 2e-55
RSS1531 A05 2470167 1e-108
RSS1533 A05 21766304 1e-108
RSS1539 A05 18310531 5e-67
RSS1542 A05 4526621 2e-85
RSS1561 A05 19308677 1e-106
RSS1577 A05 2616625 1e-111
RSS1580 A05 7350237 1e-133
RSS1591 A05 18394634 1e-126
RSS1598 A05 18829900 4e-83
RSS1610 A05 17706863 2e-66 LG3 37.3
RSS1631 A05 19099888 1e-141
RSS1654 A05 250978 8e-68
RSS1657 A05 16470274 1e-97 LG3 41.3
RSS1670 A05 6878750 1e-102 LG2 133.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus