Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2269 A05 1515452 4e-94
RSS0196 A05 1577759 2e-66
RSS2786 A05 1601890 9e-51
RSS3940 A05 1633703 1e-64
RSS2623 A05 1657562 2e-72
RSS1216 A05 1718899 3e-74
RSS3661 A05 1814826 7e-77
RSS1008 A05 1861321 3e-56
RSS1092 A05 1865689 4e-44
RSS3761 A05 1893143 2e-48
RSS1266 A05 1998161 1e-67
RSS3579 A05 1998948 1e-26
RSS3812 A05 2100048 4e-98
RSS0777 A05 2284789 1e-106
RSS1289 A05 2302760 1e-128
RSS0408 A05 2349168 9e-94
RSS0592 A05 2371924 7e-63
RSS1531 A05 2470167 1e-108
RSS0499 A05 2470902 1e-135
RSS0402 A05 2477673 3e-58
RSS1014 A05 2540266 5e-92
RSS1577 A05 2616625 1e-111
RSS2189 A05 2775761 1e-128
RSS1279 A05 2869949 1e-101
RSS3020 A05 2896496 3e-57
RSS1495 A05 2981288 1e-104
RSS3541 A05 3084437 1e-101
RSS2395 A05 3241777 1e-107
RSS3993 A05 3324675 1e-103
RSS0252 A05 3394449 1e-91
RSS1317 A05 3400454 2e-61
RSS2071 A05 3406645 1e-69
RSS3568 A05 3496946 6e-73
RSS0998 A05 3622209 7e-99
RSS0674 A05 3625364 1e-89
RSS3215 A05 3685648 3e-43
RSS2371 A05 3775651 2e-39
RSS1236 A05 3867989 8e-38
RSS0699 A05 3873548 1e-132
RSS2624 A05 3873611 2e-83
RSS1218 A05 4042197 1e-100
RSS0121 A05 4160687 7e-88
RSS3815 A05 4265194 1e-32
RSS1542 A05 4526621 2e-85
RSS1094 A05 4613936 6e-71
RSS1060 A05 4725048 1e-110
RSS3595 A05 5067286 8e-80
RSS3289 A05 5085466 7e-78
RSS3855 A05 5178734 1e-50
RSS3198 A05 5229729 3e-96
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus