Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0539 A05 5653442 6e-96
RSS0554 A05 548881 1e-127
RSS0581 A05 17243847 6e-62
RSS0582 A05 16861826 1e-145
RSS0585 A05 17700634 8e-79
RSS0592 A05 2371924 7e-63
RSS0596 A05 9793321 3e-83 LG8 30.2
RSS0599 A05 19535652 1e-86 LG3 32.3
RSS0606 A05 19228661 4e-51 LG3 67.2
RSS0607 A05 18870519 1e-110 LG3 35.3
RSS0617 A05 15667502 6e-60
RSS0618 A05 20315362 2e-98
RSS0621 A05 14779404 3e-54
RSS0626 A05 14779404 2e-39
RSS0633 A05 20840294 4e-18
RSS0656 A05 21889591 1e-76
RSS0674 A05 3625364 1e-89
RSS0683 A05 22884761 9e-87
RSS0693 A05 19962386 5e-10
RSS0699 A05 3873548 1e-132
RSS0701 A05 8438365 1e-107
RSS0714 A05 10437060 1e-101
RSS0736 A05 15533854 1e-130
RSS0750 A05 23624181 4e-22 LG2 3.5
RSS0772 A05 13336575 2e-96
RSS0777 A05 2284789 1e-106
RSS0788 A05 924312 1e-100
RSS0794 A05 18422242 1e-88 LG3 33.8
RSS0799 A05 16752151 1e-103 LG3 41.0
RSS0824 A05 886637 2e-80
RSS0835 A05 16089702 3e-87 LG3 42.4
RSS0837 A05 20738554 3e-91
RSS0840 A05 1341834 2e-40
RSS0848 A05 20593127 3e-70
RSS0865 A05 18282063 1e-111
RSS0894 A05 777442 1e-71
RSS0942 A05 5860586 6e-97 LG2 134.2
RSS0944 A05 19034301 1e-83
RSS0952 A05 23536591 1e-122
RSS0973 A05 7585372 1e-114
RSS0998 A05 3622209 7e-99
RSS1008 A05 1861321 3e-56
RSS1014 A05 2540266 5e-92
RSS1039 A05 15538344 4e-74
RSS1045 A05 1372336 4e-60
RSS1060 A05 4725048 1e-110
RSS1071 A05 22735297 1e-115
RSS1082 A05 21933047 1e-112
RSS1084 A05 5997348 1e-101 LG2 134.2
RSS1092 A05 1865689 4e-44
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus