Radish Marker Database

B. rapa genome (v1.2) list : A05

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 367


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3453 A05 16265276 6e-89 LG3 47.1
RSS3328 A05 20276715 1e-59 LG3 56.3
RSS0606 A05 19228661 4e-51 LG3 67.2
RSS2679 A05 8188152 3e-77 LG3 73.6
RSS3072 A05 13131541 4e-60 LG3 101.7
RSS2660 A05 10622426 2e-88 LG3 107.7
RSS1674 A05 21643310 3e-86 LG3 145.8
RSS0292 A05 23781817 1e-107 LG3 146.8
RSS0341 A05 3075101 9e-62 LG4 47.8
RSS1696_a A05 10552999 5e-81 LG6 53.2
RSS1843 A05 8105171 1e-86 LG7 14.3
RSS3827 A05 17083595 2e-27 LG8 13.8
RSS0596 A05 9793321 3e-83 LG8 30.2
RSS2468 A05 5662321 6e-49 LG8 41.8
RSS2675 A05 6250881 2e-69 LG8 44.8
RSS0496 A05 20600900 3e-66 LG9 0.0
RSS2094 A05 15737385 4e-62 LG9 42.9
RSS0109 A05 11034 1e-85
RSS2210 A05 19875 2e-80
RSS1963 A05 65821 1e-114
RSS3521 A05 142782 1e-137
RSS2465 A05 153955 1e-82
RSS1772 A05 248526 1e-101
RSS1654 A05 250978 8e-68
RSS2671 A05 291441 1e-105
RSS2650 A05 355517 1e-108
RSS2754 A05 360859 1e-129
RSS3715 A05 500702 1e-55
RSS0554 A05 548881 1e-127
RSS1240 A05 612023 1e-94
RSS3574 A05 618982 1e-117
RSS2895 A05 700182 4e-41
RSS2902 A05 745992 6e-70
RSS0012 A05 776143 1e-52
RSS0894 A05 777442 1e-71
RSS0824 A05 886637 2e-80
RSS1887 A05 889500 2e-43
RSS2284 A05 907314 1e-121
RSS1404 A05 911382 2e-31
RSS0788 A05 924312 1e-100
RSS3913 A05 992085 1e-70
RSS2862 A05 992746 2e-67
RSS0400 A05 1181022 5e-95
RSS3807 A05 1304864 5e-47
RSS3491 A05 1308381 7e-40
RSS1727 A05 1327333 1e-109
RSS0840 A05 1341834 2e-40
RSS3781 A05 1347355 1e-60
RSS1045 A05 1372336 4e-60
RSS2547 A05 1432547 1e-121
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 367

MarkerDB | Raphanus sativus