Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0024 A04 4443179 1e-58
RSS0034 A04 13316826 2e-78
RSS0057 A04 17107033 2e-34
RSS0075 A04 12124557 4e-83
RSS0098 A04 9115469 1e-125
RSS0103 A04 925240 1e-117
RSS0108 A04 16527413 1e-107
RSS0130 A04 15028977 2e-63
RSS0142 A04 1855877 3e-97
RSS0188 A04 5747886 2e-53
RSS0211 A04 9801055 1e-116
RSS0214 A04 13661134 6e-70
RSS0237 A04 3337044 8e-88
RSS0269 A04 13500164 5e-71
RSS0304 A04 4333400 1e-116
RSS0340 A04 18247643 1e-113
RSS0347 A04 9215849 9e-87 LG4 63.8
RSS0352 A04 11738550 2e-13
RSS0360 A04 17750943 3e-55
RSS0393 A04 13342397 6e-71 LG4 48.4
RSS0409 A04 62430 1e-125
RSS0418 A04 3984104 2e-52
RSS0423 A04 6927246 1e-137
RSS0440 A04 18247640 1e-125
RSS0450 A04 18351736 1e-103
RSS0484 A04 12955765 2e-71
RSS0507 A04 10253310 2e-94
RSS0522 A04 872665 6e-47
RSS0530 A04 16231517 1e-117
RSS0533 A04 18734143 1e-120
RSS0563 A04 10986570 1e-105
RSS0565 A04 9150110 1e-103
RSS0567 A04 17386540 1e-104
RSS0598 A04 6957707 5e-42
RSS0602 A04 12598939 3e-77
RSS0604 A04 17873257 1e-99
RSS0649 A04 3747050 4e-62 LG4 6.0
RSS0682 A04 5937642 4e-85
RSS0684 A04 7579035 1e-116
RSS0700 A04 17423315 1e-126
RSS0733 A04 3529976 1e-112
RSS0759 A04 14924169 1e-122
RSS0815 A04 15592741 1e-123
RSS0817 A04 17703836 2e-45
RSS0829 A04 17178146 1e-104
RSS0867 A04 670090 4e-56
RSS0869 A04 579052 2e-31
RSS0914 A04 7384858 7e-33
RSS0929 A04 7384730 4e-32
RSS0939 A04 16971749 1e-64
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218


MarkerDB | Raphanus sativus