Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2851 A04 8730267 4e-96
RSS2858 A04 16973522 0.13
RSS2913 A04 8055758 2e-26
RSS2919 A04 18653105 4e-57
RSS2923 A04 11357548 6e-99
RSS2929 A04 17534713 2e-37 LG4 20.5
RSS2996 A04 2893478 9e-52
RSS3026 A04 18687224 6e-48 LG3 4.2
RSS3055 A04 6254484 1e-52
RSS3064 A04 10796940 5e-92
RSS3077 A04 13660992 4e-61
RSS3114 A04 14161719 6e-61
RSS3121 A04 8340484 1e-102
RSS3124 A04 15671653 1e-103
RSS3149 A04 8288816 9e-66
RSS3150 A04 11633641 2e-90
RSS3169 A04 15008319 9e-52
RSS3218 A04 10336641 1e-122
RSS3246 A04 1688453 1e-143 LG4 4.6
RSS3247 A04 13571996 1e-71 LG4 39.6
RSS3253 A04 16766859 5e-60
RSS3297 A04 11206954 2e-64 LG4 55.0
RSS3305 A04 17711405 1e-20 LG4 32.2
RSS3320 A04 18794496 2e-96
RSS3333 A04 1014561 8e-42
RSS3340 A04 1066204 4e-66
RSS3370 A04 2508339 1e-115
RSS3382 A04 12976284 1e-108
RSS3394 A04 4333940 3e-28 LG4 7.1
RSS3397 A04 13540452 2e-77
RSS3406 A04 6376196 2e-43
RSS3409 A04 4408197 3e-95
RSS3414 A04 2889787 1e-95
RSS3421 A04 2503010 7e-85
RSS3425 A04 5123976 1e-105
RSS3432 A04 15600119 1e-08
RSS3438 A04 570331 1e-80
RSS3440 A04 6099886 6e-28
RSS3442 A04 8298377 1e-87
RSS3468 A04 5081235 0.004
RSS3482 A04 18029928 2e-81
RSS3500 A04 17109113 7e-87 LG4 30.6
RSS3501 A04 15860391 2e-91
RSS3546 A04 6015843 2e-59
RSS3592 A04 6161672 1e-109
RSS3602 A04 13689487 1e-118
RSS3604 A04 1455392 4e-89
RSS3612 A04 2044348 7e-67
RSS3617 A04 17404893 2e-71
RSS3634 A04 11367803 2e-43
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218

MarkerDB | Raphanus sativus