Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2030 A04 146420 0.13
RSS2044 A04 17740440 5e-88
RSS2057 A04 12696151 9e-67
RSS2064 A04 17103287 5e-05
RSS2074 A04 18928920 1e-117
RSS2083 A04 7925630 3e-95
RSS2084 A04 5538590 2e-40
RSS2099 A04 5738659 2e-96
RSS2119 A04 15653289 2e-76
RSS2130 A04 1992772 7e-91
RSS2163 A04 9543010 1e-124
RSS2178 A04 17694945 1e-101
RSS2195 A04 15740049 2e-32
RSS2197 A04 10821119 1e-130
RSS2220 A04 8137829 1e-121
RSS2225 A04 7652228 7e-58 LG8 39.4
RSS2227 A04 10072455 1e-114
RSS2234 A04 7497343 4e-81
RSS2245 A04 13672476 2e-51 LG4 41.9
RSS2253 A04 17870409 1e-20
RSS2259 A04 6163190 7e-96
RSS2278 A04 5985632 5e-81
RSS2282 A04 14817183 3e-69
RSS2300 A04 11357548 4e-93
RSS2337 A04 10502193 2e-98
RSS2340 A04 371694 1e-120
RSS2358 A04 10035503 1e-63
RSS2370 A04 2003120 1e-98
RSS2374 A04 5577269 1e-115
RSS2410 A04 7524900 7e-24
RSS2415 A04 17178146 1e-110 LG4 22.8
RSS2431 A04 18805031 1e-104
RSS2448 A04 10981982 1e-115
RSS2453 A04 17068010 1e-134
RSS2476 A04 15461223 9e-41
RSS2491 A04 12180940 4e-53 LG4 49.8
RSS2504 A04 1313819 2e-89
RSS2507 A04 15109778 1e-133
RSS2539 A04 5530934 1e-106
RSS2556 A04 10684709 1e-137
RSS2563 A04 15820508 2e-91
RSS2602 A04 17412686 3e-76
RSS2667 A04 14076277 7e-57 LG4 47.8
RSS2695 A04 14529993 1e-115
RSS2720 A04 17014518 3e-95
RSS2775 A04 13946955 9e-43
RSS2776 A04 17181684 6e-71
RSS2832 A04 8126253 1e-93
RSS2835 A04 10605297 1e-38
RSS2836 A04 17105460 2e-95
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218


MarkerDB | Raphanus sativus