Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3829 A04 10112466 8e-19
RSS0507 A04 10253310 2e-94
RSS3218 A04 10336641 1e-122
RSS3847 A04 10365073 9e-89 LG4 58.6
RSS2337 A04 10502193 2e-98
RSS1212 A04 10605083 2e-26
RSS2835 A04 10605297 1e-38
RSS2556 A04 10684709 1e-137
RSS3064 A04 10796940 5e-92
RSS2197 A04 10821119 1e-130
RSS1388 A04 10966211 1e-43
RSS2448 A04 10981982 1e-115
RSS0563 A04 10986570 1e-105
RSS1960 A04 11011134 1e-107
RSS1792 A04 11175503 3e-92
RSS3297 A04 11206954 2e-64 LG4 55.0
RSS1379 A04 11290915 1e-118
RSS2923 A04 11357548 6e-99
RSS2300 A04 11357548 4e-93
RSS3634 A04 11367803 2e-43
RSS1325 A04 11426970 1e-61
RSS3150 A04 11633641 2e-90
RSS3766 A04 11712593 2e-71
RSS1064 A04 11729370 1e-135 LG4 52.3
RSS0352 A04 11738550 2e-13
RSS3762 A04 11883686 1e-100
RSS1628 A04 12040948 1e-125 LG4 49.8
RSS0075 A04 12124557 4e-83
RSS3741 A04 12178054 1e-32 LG4 49.8
RSS2491 A04 12180940 4e-53 LG4 49.8
RSS3838 A04 12410808 1e-143
RSS0602 A04 12598939 3e-77
RSS2057 A04 12696151 9e-67
RSS1959 A04 12732944 1e-104
RSS3904 A04 12813742 1e-65
RSS0484 A04 12955765 2e-71
RSS3382 A04 12976284 1e-108
RSS0034 A04 13316826 2e-78
RSS0393 A04 13342397 6e-71 LG4 48.4
RSS0269 A04 13500164 5e-71
RSS3397 A04 13540452 2e-77
RSS3247 A04 13571996 1e-71 LG4 39.6
RSS3077 A04 13660992 4e-61
RSS0214 A04 13661134 6e-70
RSS2245 A04 13672476 2e-51 LG4 41.9
RSS1728 A04 13672663 9e-33
RSS3602 A04 13689487 1e-118
RSS2775 A04 13946955 9e-43
RSS2667 A04 14076277 7e-57 LG4 47.8
RSS3114 A04 14161719 6e-61
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218

MarkerDB | Raphanus sativus