Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0984 A04 5986343 7e-99
RSS0993 A04 18098505 4e-94 LG4 17.6
RSS1042 A04 3987420 5e-79 LG1 16.0
RSS1054 A04 3229578 2e-18 LG3 143.7
RSS1061 A04 5962062 1e-130 LG4 76.0
RSS1064 A04 11729370 1e-135 LG4 52.3
RSS1108 A04 17913342 2e-85
RSS1150 A04 1243634 6e-47
RSS1169 A04 15770 1e-109
RSS1203 A04 14958467 1e-57
RSS1204 A04 4571586 1e-56
RSS1212 A04 10605083 2e-26
RSS1250 A04 401937 3e-57
RSS1307 A04 18247320 3e-17
RSS1325 A04 11426970 1e-61
RSS1332 A04 17182798 1e-83
RSS1345 A04 8518072 1e-33
RSS1353 A04 14637460 7e-78
RSS1363 A04 6098677 5e-89
RSS1379 A04 11290915 1e-118
RSS1380 A04 7870830 2e-20
RSS1388 A04 10966211 1e-43
RSS1540 A04 14429476 4e-36 LG8 54.1
RSS1571 A04 4479313 3e-81
RSS1579 A04 8095500 1e-111
RSS1590 A04 8409212 9e-87
RSS1603 A04 1689428 2e-80
RSS1605 A04 16236756 3e-87
RSS1628 A04 12040948 1e-125 LG4 49.8
RSS1655 A04 9631732 6e-46
RSS1666 A04 2098600 4e-81
RSS1693 A04 4286912 9e-95
RSS1704 A04 2001077 2e-70
RSS1709 A04 14959078 1e-127
RSS1728 A04 13672663 9e-33
RSS1730 A04 18098770 7e-69
RSS1744 A04 18908719 4e-71
RSS1763 A04 2093857 2e-54 LG3 88.7
RSS1763_a A04 2093857 2e-54 LG3 105.4
RSS1773 A04 4898021 1e-120
RSS1792 A04 11175503 3e-92
RSS1802 A04 2098642 3e-87
RSS1803 A04 8130190 4e-15
RSS1828 A04 18541257 2e-90 LG4 15.5
RSS1832 A04 58023 5e-74
RSS1848 A04 15615951 1e-122
RSS1909 A04 5433931 7e-70
RSS1938 A04 1242135 5e-43
RSS1959 A04 12732944 1e-104
RSS1960 A04 11011134 1e-107
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218

MarkerDB | Raphanus sativus