Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1603 A04 1689428 2e-80
RSS0142 A04 1855877 3e-97
RSS2130 A04 1992772 7e-91
RSS1704 A04 2001077 2e-70
RSS2370 A04 2003120 1e-98
RSS3612 A04 2044348 7e-67
RSS1666 A04 2098600 4e-81
RSS1802 A04 2098642 3e-87
RSS3421 A04 2503010 7e-85
RSS3370 A04 2508339 1e-115
RSS3414 A04 2889787 1e-95
RSS2996 A04 2893478 9e-52
RSS0237 A04 3337044 8e-88
RSS0733 A04 3529976 1e-112
RSS0418 A04 3984104 2e-52
RSS1693 A04 4286912 9e-95
RSS0304 A04 4333400 1e-116
RSS3409 A04 4408197 3e-95
RSS0024 A04 4443179 1e-58
RSS1571 A04 4479313 3e-81
RSS3700 A04 4508257 4e-84
RSS1204 A04 4571586 1e-56
RSS1773 A04 4898021 1e-120
RSS3468 A04 5081235 0.004
RSS3425 A04 5123976 1e-105
RSS1909 A04 5433931 7e-70
RSS2539 A04 5530934 1e-106
RSS2084 A04 5538590 2e-40
RSS2374 A04 5577269 1e-115
RSS2099 A04 5738659 2e-96
RSS0188 A04 5747886 2e-53
RSS0682 A04 5937642 4e-85
RSS2278 A04 5985632 5e-81
RSS0984 A04 5986343 7e-99
RSS3546 A04 6015843 2e-59
RSS1363 A04 6098677 5e-89
RSS3440 A04 6099886 6e-28
RSS3592 A04 6161672 1e-109
RSS2259 A04 6163190 7e-96
RSS3055 A04 6254484 1e-52
RSS3406 A04 6376196 2e-43
RSS0423 A04 6927246 1e-137
RSS0598 A04 6957707 5e-42
RSS3915 A04 7372669 1e-124
RSS0929 A04 7384730 4e-32
RSS0914 A04 7384858 7e-33
RSS2234 A04 7497343 4e-81
RSS2410 A04 7524900 7e-24
RSS0684 A04 7579035 1e-116
RSS1380 A04 7870830 2e-20
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218

MarkerDB | Raphanus sativus