Radish Marker Database

B. rapa genome (v1.2) list : A04

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 218


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1909 A04 5433931 7e-70
RSS2539 A04 5530934 1e-106
RSS2084 A04 5538590 2e-40
RSS2374 A04 5577269 1e-115
RSS2099 A04 5738659 2e-96
RSS0188 A04 5747886 2e-53
RSS0682 A04 5937642 4e-85
RSS1061 A04 5962062 1e-130 LG4 76.0
RSS2278 A04 5985632 5e-81
RSS0984 A04 5986343 7e-99
RSS3546 A04 6015843 2e-59
RSS1363 A04 6098677 5e-89
RSS3440 A04 6099886 6e-28
RSS3592 A04 6161672 1e-109
RSS2259 A04 6163190 7e-96
RSS3055 A04 6254484 1e-52
RSS3406 A04 6376196 2e-43
RSS0423 A04 6927246 1e-137
RSS0598 A04 6957707 5e-42
RSS3915 A04 7372669 1e-124
RSS0929 A04 7384730 4e-32
RSS0914 A04 7384858 7e-33
RSS2234 A04 7497343 4e-81
RSS2410 A04 7524900 7e-24
RSS0684 A04 7579035 1e-116
RSS2225 A04 7652228 7e-58 LG8 39.4
RSS1380 A04 7870830 2e-20
RSS2083 A04 7925630 3e-95
RSS2913 A04 8055758 2e-26
RSS3844 A04 8082721 1e-80 LG2 50.3
RSS1579 A04 8095500 1e-111
RSS2832 A04 8126253 1e-93
RSS1803 A04 8130190 4e-15
RSS2220 A04 8137829 1e-121
RSS3149 A04 8288816 9e-66
RSS3943 A04 8289172 3e-83
RSS3442 A04 8298377 1e-87
RSS3121 A04 8340484 1e-102
RSS1590 A04 8409212 9e-87
RSS1345 A04 8518072 1e-33
RSS3739 A04 8659220 5e-86 LG4 66.3
RSS2851 A04 8730267 4e-96
RSS0098 A04 9115469 1e-125
RSS0565 A04 9150110 1e-103
RSS0347 A04 9215849 9e-87 LG4 63.8
RSS2163 A04 9543010 1e-124
RSS1655 A04 9631732 6e-46
RSS0211 A04 9801055 1e-116
RSS2358 A04 10035503 1e-63
RSS2227 A04 10072455 1e-114
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 218


MarkerDB | Raphanus sativus