Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0662_a A03 16509812 4e-97 LG3 143.9
RSS0662 A03 16509812 4e-97 LG2 10.9
RSS2917 A03 16623848 9e-66
RSS2830 A03 16635434 1e-102
RSS2350 A03 16673027 1e-46
RSS2191 A03 16715205 1e-119
RSS1393 A03 16877477 5e-58
RSS3450 A03 16879490 1e-107 LG3 142.9
RSS0910 A03 16880078 2e-96
RSS2704 A03 16903637 9e-41
RSS0088 A03 16918837 8e-29
RSS2986 A03 16924993 2e-67
RSS0365 A03 16925540 3e-79
RSS2749 A03 16959401 1e-138
RSS2943 A03 17143986 3e-89
RSS2077 A03 17170838 1e-52
RSS2763 A03 17172043 1e-102
RSS3222 A03 17173349 6e-55
RSS1944 A03 17214437 3e-74
RSS2733 A03 17256206 4e-25 LG3 30.0
RSS1638 A03 17376745 3e-30
RSS0451 A03 17376748 1e-110
RSS2792 A03 17612677 3e-91
RSS2387 A03 17629672 9e-60
RSS1457 A03 17748141 3e-95 LG3 143.3
RSS3062 A03 17824286 4e-58
RSS2208 A03 17918657 6e-31
RSS0680 A03 18048469 1e-105
RSS2309 A03 18189976 1e-143
RSS2985 A03 18346844 1e-106
RSS3964 A03 18427824 2e-62
RSS2799 A03 18576205 8e-92
RSS3768 A03 18589974 2e-87
RSS1183 A03 18595299 6e-68 LG3 140.0
RSS1430 A03 18595299 5e-68
RSS2263 A03 18609794 6e-93 LG3 140.7
RSS3538 A03 18638462 4e-66
RSS2534 A03 18872608 1e-30 LG3 138.2
RSS0636 A03 18877278 7e-59
RSS1623 A03 18877384 1e-141
RSS3069 A03 19190076 1e-101
RSS2100 A03 19213125 2e-70
RSS0966 A03 19306203 2e-67
RSS1137 A03 19388446 8e-64
RSS0737 A03 19433731 4e-82
RSS2890 A03 19514017 2e-40
RSS4035 A03 19521303 5e-94
RSS0029 A03 19568286 1e-81
RSS0343 A03 19621916 3e-67
RSS0086 A03 19646841 1e-108
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus