Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1931 A03 3906905 6e-67 LG8 66.9
RSS1932 A03 21292597 1e-84
RSS1937 A03 30990416 6e-52
RSS1943 A03 3090330 1e-44
RSS1944 A03 17214437 3e-74
RSS1965 A03 27667032 1e-117
RSS1977 A03 12764059 1e-112
RSS1986 A03 28742123 1e-116
RSS1997 A03 2485053 5e-94
RSS2020 A03 6704336 1e-112
RSS2035 A03 26565652 1e-37
RSS2052 A03 24476694 1e-65
RSS2054 A03 915814 3e-78
RSS2059 A03 1687030 2e-62
RSS2062 A03 6062150 1e-69
RSS2067 A03 2229387 3e-68
RSS2070 A03 24164427 1e-104
RSS2077 A03 17170838 1e-52
RSS2092 A03 30890714 2e-70
RSS2096 A03 27352303 1e-91
RSS2100 A03 19213125 2e-70
RSS2107 A03 22395774 4e-74
RSS2108 A03 3143068 2e-59 LG8 71.5
RSS2111 A03 21928507 1e-76
RSS2123 A03 9529622 7e-70
RSS2125 A03 24044289 7e-33
RSS2129 A03 5189679 1e-111 LG8 60.9
RSS2134 A03 26335630 0.001
RSS2140 A03 21291974 6e-68
RSS2146 A03 5049520 2e-61
RSS2166 A03 3504851 2e-75
RSS2169 A03 1912047 3e-48
RSS2174 A03 8648699 3e-45 LG8 38.5
RSS2191 A03 16715205 1e-119
RSS2198 A03 871455 8e-98
RSS2200 A03 14310740 2e-54
RSS2207 A03 8138560 1e-108 LG8 42.2
RSS2208 A03 17918657 6e-31
RSS2209 A03 20780734 9e-84 LG3 115.3
RSS2211 A03 5283721 1e-100
RSS2213 A03 9309623 5e-97
RSS2235 A03 2428187 4e-08
RSS2244 A03 14472097 1e-79
RSS2246 A03 474674 5e-98
RSS2263 A03 18609794 6e-93 LG3 140.7
RSS2266 A03 10416876 0.003
RSS2271 A03 31501008 9e-39
RSS2272 A03 5735998 2e-05
RSS2283 A03 25750972 5e-99
RSS2294 A03 16329016 2e-94
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus