Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1221 A03 11017248 2e-36 LG2 149.9
RSS1120 A03 11017248 2e-36
RSS1813 A03 11058393 9e-69
RSS3454 A03 11058644 7e-71
RSS3233 A03 11102163 2e-79
RSS3704 A03 11137301 2e-92
RSS1673 A03 11402222 2e-99
RSS0205 A03 11466605 2e-97
RSS0250 A03 11627154 1e-108
RSS0997 A03 11701055 3e-05 LG9 17.0
RSS1335 A03 11815461 2e-95
RSS3911 A03 11831276 6e-16
RSS0631 A03 11845641 3e-30
RSS3158 A03 12189904 3e-83
RSS3657 A03 12251041 4e-51
RSS1161 A03 12251325 1e-116 LG8 12.2
RSS2924 A03 12298977 6e-09
RSS3173 A03 12304764 5e-35 LG8 14.3
RSS2682 A03 12373031 6e-62
RSS2607 A03 12378681 6e-85
RSS3290 A03 12380525 4e-84
RSS3867 A03 12402489 1e-114
RSS1506 A03 12470613 1e-111
RSS3840 A03 12552683 1e-122
RSS0385 A03 12574565 5e-79
RSS3784 A03 12679903 1e-77
RSS1977 A03 12764059 1e-112
RSS1653 A03 12764059 3e-81
RSS1528 A03 12795056 4e-86
RSS0712 A03 13107080 1e-102
RSS1549 A03 13108209 6e-77 LG8 10.4
RSS3088 A03 13258264 3e-77
RSS1565 A03 13269700 6e-47
RSS0198 A03 13373217 1e-116 LG8 10.0
RSS3025 A03 13373402 1e-81
RSS0226 A03 13379895 1e-115
RSS0059 A03 13443755 2e-69
RSS3998 A03 13625186 4e-56
RSS1520 A03 13626520 4e-64
RSS1102 A03 13657076 1e-38
RSS3833 A03 13697239 2e-73
RSS3644 A03 13772499 1e-114 LG8 7.6
RSS0762 A03 13883523 1e-120
RSS3868 A03 14073058 2e-85
RSS2948 A03 14126826 4e-10
RSS0268 A03 14143958 2e-59
RSS0780 A03 14158580 4e-59
RSS1755 A03 14179495 1e-73
RSS3200 A03 14227341 6e-33
RSS1911 A03 14245391 1e-17
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus