Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1224 A03 475577 2e-70
RSS1225 A03 21020431 1e-114
RSS1231 A03 5577020 1e-114
RSS1245 A03 14295425 3e-70
RSS1248 A03 24826897 3e-23
RSS1252 A03 2314332 2e-66 LG9 11.3
RSS1258 A03 9249763 4e-18 LG8 33.7
RSS1261 A03 4354332 2e-42 LG8 64.6
RSS1275 A03 22437297 1e-112
RSS1291 A03 29925596 3e-78
RSS1296 A03 10768966 1e-45
RSS1304 A03 29646211 1e-103
RSS1305 A03 2918027 7e-87
RSS1319 A03 19775498 3e-86 LG3 132.9
RSS1335 A03 11815461 2e-95
RSS1343 A03 4304395 2e-70
RSS1348 A03 14496646 2e-18
RSS1352 A03 15752884 6e-83
RSS1355 A03 24536394 2e-21 LG3 59.9
RSS1365 A03 789492 1e-109
RSS1377 A03 146494 5e-18 LG8 85.4
RSS1383 A03 7080159 5e-56
RSS1384 A03 2526334 1e-114
RSS1387 A03 9501346 1e-73
RSS1393 A03 16877477 5e-58
RSS1401 A03 5039869 1e-116
RSS1402 A03 20054804 7e-70
RSS1423 A03 6333960 4e-49
RSS1426 A03 20128942 3e-88
RSS1430 A03 18595299 5e-68
RSS1434 A03 4574069 8e-16
RSS1449 A03 9974571 3e-54
RSS1456 A03 9928490 2e-93
RSS1457 A03 17748141 3e-95 LG3 143.3
RSS1459 A03 15004835 5e-76
RSS1470 A03 22843302 8e-80
RSS1479 A03 15229054 2e-67
RSS1489 A03 15948097 7e-79 LG3 13.3
RSS1494 A03 8823560 1e-107 LG8 37.5
RSS1506 A03 12470613 1e-111
RSS1507 A03 21092055 1e-105
RSS1520 A03 13626520 4e-64
RSS1524 A03 22926598 4e-34
RSS1528 A03 12795056 4e-86
RSS1544 A03 30444411 1e-113 LG4 133.6
RSS1549 A03 13108209 6e-77 LG8 10.4
RSS1551 A03 30170408 1e-96
RSS1557 A03 25777940 7e-69
RSS1565 A03 13269700 6e-47
RSS1570 A03 4625664 2e-29 LG8 15.9
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus