Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0345 A03 6712627 1e-149
RSS0350 A03 9130072 4e-80
RSS0354 A03 1239538 3e-35
RSS0355 A03 7072362 2e-44
RSS0356 A03 28979896 2e-61
RSS0365 A03 16925540 3e-79
RSS0368 A03 30627565 5e-29 LG5 135.5
RSS0374 A03 3935721 2e-84
RSS0380 A03 19974646 6e-89 LG3 111.9
RSS0383 A03 20134154 9e-74
RSS0385 A03 12574565 5e-79
RSS0395 A03 1277188 2e-30
RSS0425 A03 16314683 2e-49
RSS0426 A03 5586115 1e-139
RSS0441 A03 6844014 1e-103 LG8 22.4
RSS0451 A03 17376748 1e-110
RSS0457 A03 6022777 1e-125
RSS0458 A03 29897976 4e-97
RSS0465 A03 23433135 1e-105
RSS0468 A03 29597924 8e-72
RSS0473 A03 29477860 3e-21
RSS0479 A03 28602532 1e-123
RSS0481 A03 29504965 6e-15
RSS0486 A03 2014435 3e-89 LG8 74.5
RSS0510 A03 3139361 1e-119
RSS0523 A03 30561700 2e-64
RSS0531 A03 16186396 1e-87
RSS0538 A03 9237098 3e-43
RSS0551 A03 26596662 5e-81
RSS0557 A03 23203229 1e-74
RSS0569 A03 26449945 1e-121
RSS0586 A03 7503047 1e-107
RSS0610 A03 20240592 3e-69
RSS0611 A03 1692397 6e-49
RSS0614 A03 6511253 2e-08
RSS0622 A03 973755 1e-48
RSS0628 A03 10724791 2e-93
RSS0631 A03 11845641 3e-30
RSS0636 A03 18877278 7e-59
RSS0647 A03 20126315 3e-94 LG3 113.1
RSS0662 A03 16509812 4e-97 LG2 10.9
RSS0662_a A03 16509812 4e-97 LG3 143.9
RSS0662_b A03 16509812 4e-97 LG3 142.4
RSS0665 A03 31022664 2e-27
RSS0666 A03 23177313 2e-89
RSS0668 A03 20521654 3e-92
RSS0671 A03 5677251 2e-82
RSS0678 A03 3090787 4e-08
RSS0680 A03 18048469 1e-105
RSS0703 A03 16422696 1e-117
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus