Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3644 A03 13772499 1e-114 LG8 7.6
RSS0198 A03 13373217 1e-116 LG8 10.0
RSS1549 A03 13108209 6e-77 LG8 10.4
RSS1161 A03 12251325 1e-116 LG8 12.2
RSS3173 A03 12304764 5e-35 LG8 14.3
RSS1570 A03 4625664 2e-29 LG8 15.9
RSS0441 A03 6844014 1e-103 LG8 22.4
RSS1018 A03 10331652 2e-85 LG8 23.9
RSS0860 A03 10199251 1e-96 LG8 24.9
RSS2543 A03 10134214 1e-93 LG8 25.0
RSS1041 A03 9249748 7e-35 LG8 33.2
RSS1258 A03 9249763 4e-18 LG8 33.7
RSS3166 A03 9130906 3e-81 LG8 37.1
RSS1494 A03 8823560 1e-107 LG8 37.5
RSS2174 A03 8648699 3e-45 LG8 38.5
RSS2207 A03 8138560 1e-108 LG8 42.2
RSS2362_a A03 7820970 2e-68 LG8 43.2
RSS2981 A03 7482273 1e-111 LG8 45.2
RSS2841 A03 7166189 1e-52 LG8 45.9
RSS3288 A03 5429893 1e-95 LG8 55.9
RSS2129 A03 5189679 1e-111 LG8 60.9
RSS1261 A03 4354332 2e-42 LG8 64.6
RSS1117 A03 4224763 2e-67 LG8 66.3
RSS1931 A03 3906905 6e-67 LG8 66.9
RSS3002 A03 3958849 2e-86 LG8 67.0
RSS3172 A03 4015187 1e-115 LG8 67.0
RSS2634 A03 3826261 7e-85 LG8 68.0
RSS0832 A03 4938867 1e-123 LG8 69.8
RSS2935 A03 3413064 1e-106 LG8 70.7
RSS2108 A03 3143068 2e-59 LG8 71.5
RSS2403 A03 2554816 5e-86 LG8 72.5
RSS2764 A03 2049433 3e-84 LG8 74.3
RSS0486 A03 2014435 3e-89 LG8 74.5
RSS3168 A03 1499296 1e-31 LG8 83.5
RSS1377 A03 146494 5e-18 LG8 85.4
RSS2516 A03 7804185 1e-114 LG9 7.3
RSS1252 A03 2314332 2e-66 LG9 11.3
RSS0997 A03 11701055 3e-05 LG9 17.0
RSS2856 A03 43459 1e-67
RSS3962 A03 67288 2e-74
RSS2306 A03 366342 2e-94
RSS2246 A03 474674 5e-98
RSS1224 A03 475577 2e-70
RSS3236 A03 701107 1e-101
RSS1908 A03 728906 3e-11
RSS1365 A03 789492 1e-109
RSS2352 A03 808423 4e-84
RSS1814 A03 859864 1e-106
RSS1702 A03 866397 8e-96
RSS2198 A03 871455 8e-98
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519


MarkerDB | Raphanus sativus