Radish Marker Database

B. rapa genome (v1.2) list : A03

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 519


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2403 A03 2554816 5e-86 LG8 72.5
RSS0167 A03 2556280 1e-106
RSS2688 A03 2722554 3e-95
RSS3967 A03 2729769 2e-67
RSS3726 A03 2820023 8e-82
RSS2676 A03 2892518 2e-45
RSS1305 A03 2918027 7e-87
RSS2820 A03 2936641 6e-58
RSS3816 A03 3073872 1e-128
RSS1943 A03 3090330 1e-44
RSS0678 A03 3090787 4e-08
RSS2530 A03 3122735 4e-88
RSS0510 A03 3139361 1e-119
RSS2108 A03 3143068 2e-59 LG8 71.5
RSS3170 A03 3188961 2e-49
RSS3630 A03 3358319 1e-91
RSS2935 A03 3413064 1e-106 LG8 70.7
RSS3383 A03 3497066 2e-72
RSS0725 A03 3497066 2e-43
RSS3923 A03 3500087 9e-75
RSS2166 A03 3504851 2e-75
RSS3573 A03 3563840 4e-86
RSS0961 A03 3584541 2e-60
RSS2904 A03 3648407 3e-88
RSS2634 A03 3826261 7e-85 LG8 68.0
RSS3238 A03 3904182 2e-86
RSS1931 A03 3906905 6e-67 LG8 66.9
RSS0374 A03 3935721 2e-84
RSS3002 A03 3958849 2e-86 LG8 67.0
RSS3968 A03 3990821 7e-05
RSS3172 A03 4015187 1e-115 LG8 67.0
RSS1117 A03 4224763 2e-67 LG8 66.3
RSS1343 A03 4304395 2e-70
RSS1584 A03 4312591 1e-62
RSS1261 A03 4354332 2e-42 LG8 64.6
RSS2594 A03 4354344 7e-29 LG5 38.3
RSS4019 A03 4505125 3e-38
RSS1434 A03 4574069 8e-16
RSS1570 A03 4625664 2e-29 LG8 15.9
RSS1614 A03 4655429 7e-84 LG5 60.8
RSS2826 A03 4806469 1e-92
RSS0832 A03 4938867 1e-123 LG8 69.8
RSS2672 A03 5019862 1e-114
RSS1401 A03 5039869 1e-116
RSS2146 A03 5049520 2e-61
RSS1608 A03 5164408 2e-85
RSS2609 A03 5182584 8e-43
RSS2129 A03 5189679 1e-111 LG8 60.9
RSS3792 A03 5244703 4e-83
RSS3099 A03 5261042 1e-76
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 519

MarkerDB | Raphanus sativus