Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0001 A02 17648696 2e-10
RSS0003 A02 21342213 5e-30
RSS0013 A02 19468176 1e-61
RSS0014 A02 5022751 6e-82
RSS0035 A02 1737766 2e-27
RSS0044 A02 23655658 1e-91
RSS0049 A02 21087074 9e-82 LG2 55.1
RSS0076 A02 862527 3e-35
RSS0080 A02 1737870 8e-26 LG1 109.3
RSS0087 A02 16091749 2e-76
RSS0114 A02 11988463 6e-94
RSS0119 A02 5445884 1e-101 LG5 58.4
RSS0182 A02 862472 7e-23
RSS0224 A02 2423487 1e-127
RSS0239 A02 1966690 1e-48 LG1 110.0
RSS0241 A02 7578875 5e-49
RSS0247 A02 5203414 2e-48
RSS0259 A02 26880821 1e-51
RSS0284 A02 129690 5e-06 LG2 0.0
RSS0293 A02 7672275 1e-115
RSS0306 A02 5747009 3e-14
RSS0311 A02 22828064 2e-53
RSS0329 A02 238633 1e-107
RSS0330 A02 4003671 1e-111
RSS0332 A02 13917981 1e-144
RSS0335 A02 13987236 8e-72
RSS0339 A02 27106633 1e-103
RSS0370 A02 3005711 7e-57
RSS0373 A02 16726566 1e-31 LG5 35.4
RSS0389 A02 22827866 1e-135
RSS0391 A02 21007019 2e-67
RSS0398 A02 22427804 1e-87
RSS0404 A02 16821418 6e-08 LG6 67.0
RSS0407 A02 20181897 1e-81
RSS0422 A02 19578928 1e-115
RSS0453 A02 25035938 5e-47
RSS0461 A02 1290799 5e-91
RSS0463 A02 23087468 5e-97
RSS0464 A02 19716152 1e-106
RSS0477 A02 13572372 2e-59 LG5 4.2
RSS0482 A02 2568605 0.002
RSS0495 A02 7118882 8e-40
RSS0509 A02 6896993 5e-37
RSS0552 A02 8226329 1e-76
RSS0556 A02 6896755 1e-41
RSS0576 A02 1447301 5e-92
RSS0587 A02 11322683 1e-124
RSS0588 A02 21012626 1e-101
RSS0591 A02 1266325 2e-46
RSS0630 A02 15789955 1e-135
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus