Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1885 A02 14058471 3e-90 LG5 2.5
RSS1907 A02 11582412 7e-11
RSS1928 A02 12995313 1e-16
RSS1947 A02 25970294 7e-75
RSS1956 A02 1447072 1e-135
RSS1982 A02 24536127 2e-46
RSS1992 A02 1825454 1e-130
RSS2010 A02 17650423 1e-09
RSS2022 A02 6572436 4e-81
RSS2024 A02 10214762 2e-56
RSS2036 A02 15949903 5e-38
RSS2046 A02 5935169 2e-07
RSS2048 A02 7512066 1e-91
RSS2049 A02 10444308 1e-123
RSS2055 A02 23152060 1e-113
RSS2058 A02 16024452 2e-18
RSS2068 A02 5323781 1e-62
RSS2075 A02 27352374 1e-64
RSS2081 A02 16821475 2e-18 LG5 34.5
RSS2137 A02 7516891 2e-07
RSS2141 A02 15507094 6e-74
RSS2148 A02 613990 5e-41
RSS2212 A02 27056799 3e-56
RSS2254 A02 119481 2e-61
RSS2258 A02 4072610 3e-84
RSS2261 A02 16240198 2e-87
RSS2268 A02 643857 1e-70
RSS2273 A02 19680257 1e-91
RSS2274 A02 14820906 6e-18
RSS2322 A02 7106046 1e-10
RSS2324 A02 6395611 1e-110
RSS2366 A02 23943277 3e-77
RSS2382 A02 15404413 1e-129
RSS2394 A02 5795811 8e-48 LG5 59.6
RSS2447 A02 6564927 1e-109
RSS2451 A02 23867294 1e-30
RSS2452 A02 2919881 6e-65
RSS2475 A02 23301286 3e-35
RSS2517 A02 13739213 6e-88
RSS2521 A02 24897280 9e-79
RSS2524 A02 5246871 1e-102
RSS2528 A02 7428894 5e-41
RSS2540 A02 4969756 2e-93
RSS2544 A02 8247392 1e-107
RSS2555 A02 22435814 1e-41
RSS2565 A02 21629311 2e-92
RSS2572 A02 16702509 1e-127 LG5 35.6
RSS2580 A02 3479427 1e-72
RSS2585 A02 12473649 1e-100
RSS2589 A02 1094326 2e-62
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus