Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3417 A02 11725689 1e-54
RSS1836 A02 11801551 1e-116
RSS1049 A02 11968522 7e-76
RSS0828 A02 11968758 5e-81
RSS0114 A02 11988463 6e-94
RSS3718 A02 12000405 6e-96
RSS3881 A02 12146756 2e-62
RSS3710 A02 12158705 2e-92
RSS1105 A02 12393592 4e-40
RSS3970 A02 12428725 7e-38
RSS1581 A02 12473180 8e-94
RSS2585 A02 12473649 1e-100
RSS1831 A02 12569471 2e-84
RSS1847 A02 12603541 1e-17
RSS3472 A02 12897858 1e-06
RSS1928 A02 12995313 1e-16
RSS3942 A02 13056949 2e-65
RSS0822 A02 13116875 8e-79 LG5 0.0
RSS0477 A02 13572372 2e-59 LG5 4.2
RSS3032 A02 13657259 1e-68
RSS2517 A02 13739213 6e-88
RSS3047 A02 13868494 2e-90
RSS0332 A02 13917981 1e-144
RSS1321 A02 13978160 2e-91
RSS0335 A02 13987236 8e-72
RSS1737 A02 14031766 1e-49 LG1 64.6
RSS3709 A02 14032095 3e-79
RSS3689 A02 14032185 9e-90
RSS0717 A02 14057521 7e-52
RSS1885 A02 14058471 3e-90 LG5 2.5
RSS2625 A02 14303088 8e-78
RSS2274 A02 14820906 6e-18
RSS1081 A02 14870839 3e-89
RSS1749 A02 14945273 1e-101
RSS1880 A02 15039800 6e-05
RSS1838 A02 15151609 1e-108
RSS3848 A02 15174931 2e-70
RSS1663 A02 15208609 5e-61
RSS3747 A02 15366248 8e-65
RSS2382 A02 15404413 1e-129
RSS2141 A02 15507094 6e-74
RSS3938 A02 15564900 2e-69
RSS3206 A02 15667806 2e-89
RSS2824 A02 15702770 4e-57
RSS0630 A02 15789955 1e-135
RSS3571 A02 15859031 3e-90
RSS3228 A02 15871340 2e-39
RSS3036 A02 15912620 1e-68
RSS2940 A02 15949903 6e-71
RSS2036 A02 15949903 5e-38
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus