Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS3518 A02 451458 1e-45
RSS3753 A02 457724 8e-73
RSS2148 A02 613990 5e-41
RSS2268 A02 643857 1e-70
RSS3004 A02 645378 1e-106
RSS3230 A02 720668 1e-119
RSS3714 A02 840072 1e-57
RSS0182 A02 862472 7e-23
RSS0076 A02 862527 3e-35
RSS1135 A02 862961 4e-75
RSS3725 A02 878081 4e-47
RSS3296 A02 939466 1e-89
RSS1160 A02 965216 1e-108
RSS3531 A02 1006121 2e-83
RSS2743 A02 1043787 8e-56
RSS3720 A02 1082169 2e-91
RSS2589 A02 1094326 2e-62
RSS3560 A02 1194524 1e-110
RSS0591 A02 1266325 2e-46
RSS0461 A02 1290799 5e-91
RSS1197 A02 1346858 9e-93
RSS1956 A02 1447072 1e-135
RSS0576 A02 1447301 5e-92
RSS0935 A02 1480321 1e-90
RSS1840 A02 1734253 2e-83
RSS0744 A02 1737499 1e-84
RSS1200 A02 1737766 1e-39
RSS0035 A02 1737766 2e-27
RSS3675 A02 1765721 6e-66
RSS1992 A02 1825454 1e-130
RSS2955 A02 2024554 3e-25
RSS2723 A02 2024822 6e-48
RSS3410 A02 2226520 1e-122
RSS0224 A02 2423487 1e-127
RSS0482 A02 2568605 0.002
RSS2972 A02 2673546 6e-80
RSS2452 A02 2919881 6e-65
RSS0751 A02 2988788 2e-14
RSS0370 A02 3005711 7e-57
RSS1866 A02 3231753 4e-84
RSS3396 A02 3272481 1e-101
RSS3429 A02 3275206 7e-99
RSS2762 A02 3298868 4e-75
RSS3232 A02 3382046 1e-91
RSS2580 A02 3479427 1e-72
RSS3147 A02 3563811 2e-12
RSS2732 A02 3650622 1e-119
RSS1658 A02 3878908 1e-33
RSS1107 A02 3892793 1e-30
RSS0330 A02 4003671 1e-111
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320

MarkerDB | Raphanus sativus