Radish Marker Database

B. rapa genome (v1.2) list : A02

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 320


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0370 A02 3005711 7e-57
RSS1866 A02 3231753 4e-84
RSS3396 A02 3272481 1e-101
RSS3429 A02 3275206 7e-99
RSS2762 A02 3298868 4e-75
RSS3232 A02 3382046 1e-91
RSS2580 A02 3479427 1e-72
RSS3147 A02 3563811 2e-12
RSS1063 A02 3630352 2e-14 LG6 82.3
RSS2732 A02 3650622 1e-119
RSS1658 A02 3878908 1e-33
RSS1107 A02 3892793 1e-30
RSS1031 A02 3946301 2e-47 LG5 104.3
RSS0330 A02 4003671 1e-111
RSS2258 A02 4072610 3e-84
RSS3823 A02 4172305 6e-46
RSS1145 A02 4232001 1e-103
RSS0871 A02 4346846 1e-134
RSS1784 A02 4536765 1e-99
RSS2706 A02 4754459 5e-41 LG1 107.5
RSS1743 A02 4785319 5e-86 LG8 67.3
RSS2540 A02 4969756 2e-93
RSS1752 A02 5022455 5e-64 LG1 73.0
RSS0014 A02 5022751 6e-82
RSS1441 A02 5134757 3e-45
RSS0247 A02 5203414 2e-48
RSS0970 A02 5210895 4e-63
RSS1800 A02 5213966 2e-91
RSS2524 A02 5246871 1e-102
RSS2068 A02 5323781 1e-62
RSS0692 A02 5372781 1e-60 LG8 66.3
RSS1718 A02 5383474 1e-73
RSS0789 A02 5384771 1e-82 LG8 65.5
RSS0741 A02 5384771 1e-111
RSS0119 A02 5445884 1e-101 LG5 58.4
RSS2666 A02 5481864 2e-92
RSS3492 A02 5570196 1e-30
RSS2747 A02 5574238 2e-30
RSS3685 A02 5701132 6e-89
RSS3736 A02 5708873 1e-126 LG5 59.1
RSS0306 A02 5747009 3e-14
RSS1341 A02 5762170 2e-83 LG5 59.7
RSS2394 A02 5795811 8e-48 LG5 59.6
RSS1076 A02 5795811 9e-78 LG5 60.1
RSS2046 A02 5935169 2e-07
RSS1881 A02 6148382 8e-80
RSS1532 A02 6254749 3e-69 LG6 33.6
RSS2324 A02 6395611 1e-110
RSS0823 A02 6396650 1e-124
RSS2616 A02 6475525 1e-104
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 320


MarkerDB | Raphanus sativus