Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0018 A01 6339211 4e-78
RSS0026 A01 12401197 6e-65
RSS0054 A01 2137272 3e-76
RSS0065 A01 7723253 3e-43
RSS0077 A01 24896599 3e-69
RSS0081 A01 10864631 4e-12
RSS0122 A01 6629206 1e-99
RSS0124 A01 15959532 8e-39 LG2 30.8
RSS0139 A01 24825620 2e-95 LG3 24.9
RSS0140 A01 9024903 5e-19 LG6 118.2
RSS0158 A01 4668549 1e-122
RSS0183 A01 4293823 3e-87
RSS0185 A01 27241215 9e-84
RSS0191 A01 11294240 1e-93
RSS0197 A01 3187275 8e-70
RSS0199 A01 1441805 8e-82
RSS0215 A01 3124780 6e-84
RSS0256 A01 26045559 1e-81
RSS0265 A01 12148012 1e-110
RSS0277 A01 4927701 1e-123
RSS0294 A01 5718492 1e-122 LG7 63.9
RSS0297 A01 18413904 1e-84
RSS0305 A01 10258937 1e-05 LG7 48.3
RSS0308 A01 2779853 5e-96
RSS0314 A01 8526118 1e-106
RSS0319 A01 2561119 3e-68
RSS0334 A01 18407572 1e-115
RSS0336 A01 866304 3e-89
RSS0337 A01 15950973 3e-64
RSS0351 A01 952666 5e-98
RSS0379 A01 25370073 2e-53
RSS0381 A01 12405667 2e-18
RSS0388 A01 5253308 1e-103
RSS0415 A01 1988932 2e-62
RSS0420 A01 13872538 1e-136
RSS0459 A01 6748104 5e-87
RSS0467 A01 13797649 2e-04
RSS0480 A01 3713085 1e-127
RSS0505 A01 1477529 1e-90
RSS0518 A01 17775908 1e-123 LG2 27.9
RSS0541 A01 18902757 1e-114
RSS0542 A01 22763363 1e-105
RSS0545 A01 13955400 1e-89
RSS0546 A01 23630857 7e-79
RSS0558 A01 835662 4e-86
RSS0568 A01 2707445 2e-89
RSS0571 A01 4384045 2e-94
RSS0590 A01 12416807 3e-55 LG5 105.6
RSS0595 A01 27057597 1e-108
RSS0605 A01 2566548 3e-97
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus