Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1501 A01 25271493 2e-31 LG2 5.0
RSS3965_a A01 28435589 2e-75 LG2 5.8
RSS0818 A01 28048488 2e-22 LG2 6.1
RSS2760 A01 27563467 1e-100 LG2 7.3
RSS2859 A01 27621276 2e-88 LG2 7.3
RSS0864 A01 27804750 6e-56 LG2 7.3
RSS2138 A01 26428759 3e-50 LG2 10.7
RSS2497 A01 22145213 3e-81 LG2 18.8
RSS0895 A01 21256938 1e-126 LG2 19.3
RSS2680 A01 20893965 1e-104 LG2 20.2
RSS1367 A01 20202850 1e-102 LG2 20.3
RSS3306 A01 20924572 1e-66 LG2 20.3
RSS3125 A01 20893965 6e-98 LG2 20.5
RSS3489 A01 20168451 2e-30 LG2 21.1
RSS0768 A01 20267845 1e-120 LG2 22.1
RSS3301 A01 20267560 1e-120 LG2 25.9
RSS0518 A01 17775908 1e-123 LG2 27.9
RSS0124 A01 15959532 8e-39 LG2 30.8
RSS2701 A01 16390682 2e-37 LG2 31.0
RSS0895_a A01 21256938 1e-126 LG2 37.6
RSS3589 A01 4172345 2e-68 LG2 63.2
RSS0654 A01 12693111 1e-43 LG2 84.7
RSS2335 A01 23947030 2e-87 LG2 86.6
RSS2968 A01 23880180 3e-31 LG2 118.2
RSS2296 A01 28370235 4e-56 LG3 4.3
RSS0139 A01 24825620 2e-95 LG3 24.9
RSS0922 A01 18374756 1e-142 LG3 136.0
RSS1661 A01 28070493 1e-110 LG3 147.1
RSS1675 A01 12907815 4e-23 LG4 94.9
RSS3591 A01 10831068 1e-109 LG4 121.8
RSS0858 A01 4874004 3e-72 LG4 123.7
RSS3716 A01 10330101 2e-51 LG4 129.9
RSS3530_a A01 338368 3e-14 LG5 38.2
RSS1140 A01 13189282 9e-81 LG5 39.1
RSS3936 A01 15375343 1e-146 LG5 50.2
RSS0590 A01 12416807 3e-55 LG5 105.6
RSS3354 A01 4636070 4e-51 LG5 106.6
RSS3742 A01 11040074 6e-65 LG5 106.7
RSS2368 A01 11719390 1e-120 LG5 106.7
RSS2367 A01 5759564 1e-84 LG5 108.8
RSS0715 A01 6194720 3e-63 LG5 109.8
RSS1692 A01 6424376 1e-119 LG5 109.8
RSS3707 A01 6270754 1e-127 LG5 109.9
RSS1500 A01 6553095 1e-117 LG5 110.2
RSS4012 A01 6606829 5e-92 LG5 110.2
RSS0645 A01 672510 1e-29 LG5 111.5
RSS2678 A01 673206 9e-18 LG5 111.5
RSS1152 A01 7280145 5e-95 LG5 111.5
RSS2001 A01 7994858 3e-70 LG5 114.0
RSS1170 A01 8011899 4e-91 LG5 114.4
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


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