Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3487 A01 3323777 2e-25
RSS3489 A01 20168451 2e-30 LG2 21.1
RSS3504 A01 28417053 4e-25
RSS3525 A01 23451687 1e-68
RSS3530_a A01 338368 3e-14 LG5 38.2
RSS3559 A01 2473802 2e-64
RSS3566 A01 3083641 8e-79 LG5 126.6
RSS3575 A01 24723690 1e-137
RSS3582 A01 1058398 4e-78
RSS3588 A01 25317058 1e-102
RSS3589 A01 4172345 2e-68 LG2 63.2
RSS3591 A01 10831068 1e-109 LG4 121.8
RSS3642 A01 19705024 0.002
RSS3659 A01 3000289 4e-94
RSS3660 A01 1840438 6e-67
RSS3690 A01 3138600 1e-115
RSS3699 A01 10107114 4e-79
RSS3702 A01 4328879 4e-91 LG5 121.0
RSS3705 A01 11302317 1e-96
RSS3707 A01 6270754 1e-127 LG5 109.9
RSS3716 A01 10330101 2e-51 LG4 129.9
RSS3717 A01 7455895 5e-82
RSS3721 A01 11243771 8e-52
RSS3722 A01 28412186 5e-65
RSS3728 A01 766758 1e-82
RSS3742 A01 11040074 6e-65 LG5 106.7
RSS3756 A01 10479056 1e-27
RSS3770 A01 28360098 3e-44
RSS3794 A01 27443522 1e-110
RSS3805 A01 3433659 8e-12 LG5 124.4
RSS3811 A01 9276541 3e-74
RSS3820 A01 19772821 4e-93
RSS3841 A01 3126843 3e-64
RSS3842 A01 3295345 1e-48
RSS3866 A01 2888235 3e-78
RSS3873 A01 15742651 7e-39
RSS3885 A01 2951997 1e-69
RSS3891 A01 3938740 6e-79
RSS3894 A01 19928547 1e-82
RSS3905 A01 23748206 4e-93
RSS3907 A01 12378429 4e-07
RSS3909 A01 6138722 4e-59
RSS3925 A01 17823440 2e-91
RSS3935 A01 828439 9e-80
RSS3936 A01 15375343 1e-146 LG5 50.2
RSS3939 A01 23410410 3e-94
RSS3948 A01 5825948 3e-91
RSS3960 A01 6436364 1e-110
RSS3965_a A01 28435589 2e-75 LG2 5.8
RSS3975 A01 12661381 4e-45
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus