Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3329 A01 25236422 3e-80
RSS1501 A01 25271493 2e-31 LG2 5.0
RSS3588 A01 25317058 1e-102
RSS0379 A01 25370073 2e-53
RSS1842 A01 25391609 2e-64
RSS3224 A01 25405663 3e-99
RSS2769 A01 25446191 1e-108
RSS1925 A01 25579386 2e-63
RSS1143 A01 25583534 1e-63
RSS1306 A01 25874911 2e-28
RSS0256 A01 26045559 1e-81
RSS2303 A01 26217959 1e-122
RSS1816 A01 26374327 6e-99
RSS2811 A01 26398169 3e-25
RSS2138 A01 26428759 3e-50 LG2 10.7
RSS1980 A01 26487177 9e-65
RSS2238 A01 26568858 3e-78
RSS1318 A01 26647105 1e-111
RSS0742 A01 26762004 2e-74
RSS1475 A01 26908829 1e-115 LG6 91.1
RSS3475 A01 26968223 1e-107
RSS0595 A01 27057597 1e-108
RSS3171 A01 27123651 8e-73
RSS3021 A01 27182559 1e-145
RSS0185 A01 27241215 9e-84
RSS0613 A01 27328538 3e-90
RSS2604 A01 27352601 3e-68
RSS3794 A01 27443522 1e-110
RSS0644 A01 27450105 2e-73
RSS2957 A01 27539457 1e-70
RSS2760 A01 27563467 1e-100 LG2 7.3
RSS2800 A01 27569389 1e-106
RSS2859 A01 27621276 2e-88 LG2 7.3
RSS1298 A01 27804246 1e-06
RSS0864 A01 27804750 6e-56 LG2 7.3
RSS2427 A01 27833255 2e-93
RSS2745 A01 27858866 1e-116
RSS2467 A01 27861453 9e-45
RSS2620 A01 27940689 1e-135
RSS1919 A01 27945419 1e-113
RSS1521 A01 27962188 6e-87
RSS0818 A01 28048488 2e-22 LG2 6.1
RSS1739 A01 28052910 2e-75
RSS1661 A01 28070493 1e-110 LG3 147.1
RSS2596 A01 28126481 5e-61
RSS3770 A01 28360098 3e-44
RSS2296 A01 28370235 4e-56 LG3 4.3
RSS1294 A01 28376281 3e-89
RSS3722 A01 28412186 5e-65
RSS3504 A01 28417053 4e-25
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus