Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2956 A01 2474856 1e-35
RSS2957 A01 27539457 1e-70
RSS2966 A01 9179435 2e-91
RSS2968 A01 23880180 3e-31 LG2 118.2
RSS2982 A01 8547781 6e-65
RSS2990 A01 8161198 1e-56
RSS2991 A01 21331101 1e-116
RSS3005 A01 12473985 1e-82
RSS3019 A01 2402898 8e-77
RSS3021 A01 27182559 1e-145
RSS3039 A01 10290968 1e-38
RSS3046 A01 608799 1e-72
RSS3053 A01 332310 1e-122 LG5 134.6
RSS3068 A01 3732300 4e-81
RSS3094 A01 8639111 1e-106 LG5 117.0
RSS3120 A01 11049335 7e-10
RSS3125 A01 20893965 6e-98 LG2 20.5
RSS3148 A01 10673591 3e-29
RSS3151 A01 24663672 2e-56
RSS3156 A01 5280903 4e-10
RSS3171 A01 27123651 8e-73
RSS3183 A01 3023943 2e-09
RSS3185 A01 3815977 1e-91
RSS3197 A01 3056725 5e-61 LG5 147.5
RSS3224 A01 25405663 3e-99
RSS3227 A01 4322680 1e-122
RSS3241 A01 7472333 6e-64
RSS3280 A01 22054805 1e-97
RSS3282 A01 24740472 3e-54
RSS3301 A01 20267560 1e-120 LG2 25.9
RSS3302 A01 9863209 4e-73
RSS3306 A01 20924572 1e-66 LG2 20.3
RSS3312 A01 7966089 4e-82
RSS3314 A01 2831863 9e-60
RSS3323 A01 4749134 7e-57
RSS3327 A01 6291931 3e-80
RSS3329 A01 25236422 3e-80
RSS3337 A01 9953457 8e-40
RSS3346 A01 1234354 2e-60
RSS3347 A01 23538245 1e-110
RSS3354 A01 4636070 4e-51 LG5 106.6
RSS3379 A01 8175497 7e-78
RSS3404 A01 21541575 5e-89
RSS3412 A01 28554928 6e-51
RSS3418 A01 120901 2e-97
RSS3439 A01 5458394 2e-75
RSS3449 A01 609179 1e-116 LG5 134.6
RSS3460 A01 23480412 4e-34
RSS3474 A01 15660660 2e-14
RSS3475 A01 26968223 1e-107
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus