Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2467 A01 27861453 9e-45
RSS2483 A01 3241219 5e-09 LG5 125.0
RSS2492 A01 10140034 4e-93
RSS2493 A01 5518444 2e-54
RSS2497 A01 22145213 3e-81 LG2 18.8
RSS2499 A01 23966086 7e-95
RSS2503 A01 7736826 2e-74 LG5 134.6
RSS2508 A01 1740499 1e-100 LG5 129.3
RSS2515 A01 10479362 2e-84
RSS2557 A01 437939 1e-114
RSS2576 A01 1740604 7e-85
RSS2596 A01 28126481 5e-61
RSS2599 A01 4538904 1e-120
RSS2604 A01 27352601 3e-68
RSS2620 A01 27940689 1e-135
RSS2631 A01 10699462 8e-77
RSS2643 A01 14930598 1e-119
RSS2661 A01 19000749 1e-109 LG6 59.7
RSS2663 A01 16979356 1e-15
RSS2678 A01 673206 9e-18 LG5 111.5
RSS2680 A01 20893965 1e-104 LG2 20.2
RSS2681 A01 28553247 4e-91
RSS2686 A01 19778348 5e-44
RSS2701 A01 16390682 2e-37 LG2 31.0
RSS2715 A01 141635 1e-64
RSS2722 A01 8175497 1e-54
RSS2725 A01 23412435 2e-98
RSS2729 A01 4889295 1e-144
RSS2745 A01 27858866 1e-116
RSS2751 A01 10652663 3e-71
RSS2752 A01 8412351 8e-97 LG5 116.3
RSS2760 A01 27563467 1e-100 LG2 7.3
RSS2769 A01 25446191 1e-108
RSS2781 A01 17603558 1e-134
RSS2784 A01 5087578 1e-108
RSS2800 A01 27569389 1e-106
RSS2804 A01 1386884 1e-117
RSS2805 A01 121719 1e-12
RSS2811 A01 26398169 3e-25
RSS2853 A01 21251592 1e-95
RSS2855 A01 11703027 3e-83
RSS2859 A01 27621276 2e-88 LG2 7.3
RSS2860 A01 872168 1e-107
RSS2898 A01 8439710 6e-89 LG5 116.1
RSS2900 A01 15481031 1e-121
RSS2903 A01 3732300 1e-65
RSS2906 A01 20506090 4e-29
RSS2907 A01 5936472 1e-93
RSS2932 A01 1495467 1e-114
RSS2952 A01 5490691 3e-47
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus