Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2050 A01 4172345 2e-91
RSS2066 A01 10852080 2e-94
RSS2072 A01 28457982 1e-121
RSS2086 A01 899789 1e-88
RSS2104 A01 23841452 5e-72
RSS2114 A01 9952402 3e-91 LG5 119.6
RSS2116 A01 6869906 1e-75
RSS2121 A01 14626401 1e-87
RSS2133 A01 21533111 4e-81
RSS2135 A01 10700973 1e-55
RSS2138 A01 26428759 3e-50 LG2 10.7
RSS2139 A01 7524021 1e-120
RSS2142 A01 7836773 2e-79
RSS2149 A01 22104392 1e-39
RSS2152 A01 4174468 1e-35
RSS2158 A01 9892895 1e-122
RSS2165 A01 22353226 1e-87
RSS2176 A01 594279 7e-35
RSS2205 A01 14024676 8e-75
RSS2222 A01 20700550 1e-131
RSS2228 A01 767092 1e-105
RSS2238 A01 26568858 3e-78
RSS2239 A01 4059000 2e-98
RSS2256 A01 28436585 3e-75
RSS2264 A01 9687363 1e-110
RSS2276 A01 24427187 1e-61
RSS2281 A01 19891768 4e-92
RSS2292 A01 8647399 1e-108
RSS2296 A01 28370235 4e-56 LG3 4.3
RSS2297 A01 17896302 6e-45
RSS2299 A01 6589545 1e-108
RSS2303 A01 26217959 1e-122
RSS2304 A01 7941850 9e-96
RSS2312 A01 18866650 2e-85
RSS2314 A01 2094468 3e-47
RSS2330 A01 13594707 1e-100
RSS2335 A01 23947030 2e-87 LG2 86.6
RSS2338 A01 8673507 1e-101
RSS2339 A01 5809103 2e-48
RSS2367 A01 5759564 1e-84 LG5 108.8
RSS2368 A01 11719390 1e-120 LG5 106.7
RSS2375 A01 13595042 1e-110
RSS2385 A01 16758148 1e-127
RSS2391 A01 7511784 1e-117
RSS2401 A01 993885 3e-95
RSS2427 A01 27833255 2e-93
RSS2441 A01 20562894 1e-92
RSS2443 A01 3544948 1e-108
RSS2446 A01 9086070 7e-98
RSS2464 A01 6148836 2e-89
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus