Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS3039 A01 10290968 1e-38
RSS0619 A01 10329126 1e-107
RSS3716 A01 10330101 2e-51 LG4 129.9
RSS0880 A01 10449182 1e-40
RSS3756 A01 10479056 1e-27
RSS2515 A01 10479362 2e-84
RSS4002 A01 10480217 1e-119 LG7 69.0
RSS1433 A01 10581919 2e-96 LG7 69.0
RSS4005 A01 10640820 2e-66
RSS2751 A01 10652663 3e-71
RSS1861 A01 10652820 1e-47
RSS2034 A01 10665854 1e-93
RSS3148 A01 10673591 3e-29
RSS2631 A01 10699462 8e-77
RSS2135 A01 10700973 1e-55
RSS3591 A01 10831068 1e-109 LG4 121.8
RSS2066 A01 10852080 2e-94
RSS0081 A01 10864631 4e-12
RSS1981 A01 10927001 5e-24
RSS1462 A01 10954316 6e-57
RSS3742 A01 11040074 6e-65 LG5 106.7
RSS1269 A01 11040296 2e-57
RSS3120 A01 11049335 7e-10
RSS0795 A01 11099410 1e-109
RSS1643 A01 11119430 1e-67
RSS0612 A01 11230788 1e-115
RSS3721 A01 11243771 8e-52
RSS0191 A01 11294240 1e-93
RSS3705 A01 11302317 1e-96
RSS1878 A01 11392260 4e-71
RSS1529 A01 11482770 2e-45
RSS0945 A01 11485431 1e-106
RSS1824 A01 11611566 4e-45
RSS2855 A01 11703027 3e-83
RSS2368 A01 11719390 1e-120 LG5 106.7
RSS1077 A01 11809604 1e-131
RSS0265 A01 12148012 1e-110
RSS3907 A01 12378429 4e-07
RSS0026 A01 12401197 6e-65
RSS0381 A01 12405667 2e-18
RSS0590 A01 12416807 3e-55 LG5 105.6
RSS3005 A01 12473985 1e-82
RSS3975 A01 12661381 4e-45
RSS0654 A01 12693111 1e-43 LG2 84.7
RSS1285 A01 12783230 1e-127
RSS1656 A01 12862396 5e-22
RSS1675 A01 12907815 4e-23 LG4 94.9
RSS1140 A01 13189282 9e-81 LG5 39.1
RSS2330 A01 13594707 1e-100
RSS2375 A01 13595042 1e-110
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus