Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1595 A01 279807 3e-80 LG5 134.5
RSS1620 A01 8397366 1e-113
RSS1632 A01 10241347 1e-91
RSS1640 A01 1286086 1e-83 LG5 130.6
RSS1642 A01 24875107 2e-55
RSS1643 A01 11119430 1e-67
RSS1646 A01 18550081 5e-98
RSS1656 A01 12862396 5e-22
RSS1660 A01 8225131 7e-14 LG6 56.0
RSS1661 A01 28070493 1e-110 LG3 147.1
RSS1675 A01 12907815 4e-23 LG4 94.9
RSS1688 A01 562727 2e-31
RSS1690 A01 23327711 3e-82
RSS1692 A01 6424376 1e-119 LG5 109.8
RSS1694 A01 15564321 1e-117
RSS1701 A01 7765711 4e-95
RSS1739 A01 28052910 2e-75
RSS1741 A01 7696453 1e-104
RSS1746 A01 25057232 1e-86
RSS1751 A01 6195349 7e-46
RSS1762 A01 9367772 1e-124
RSS1776 A01 7524432 1e-116
RSS1779 A01 8425291 1e-113
RSS1793 A01 8404832 2e-63
RSS1796 A01 2087003 3e-44 LG5 128.1
RSS1816 A01 26374327 6e-99
RSS1823 A01 25016463 4e-70
RSS1824 A01 11611566 4e-45
RSS1842 A01 25391609 2e-64
RSS1854 A01 21804541 5e-87
RSS1856 A01 28579056 6e-44
RSS1859 A01 3222555 1e-78
RSS1861 A01 10652820 1e-47
RSS1876 A01 10039415 3e-24
RSS1878 A01 11392260 4e-71
RSS1886 A01 10137522 5e-77
RSS1895 A01 6001868 1e-121
RSS1919 A01 27945419 1e-113
RSS1925 A01 25579386 2e-63
RSS1935 A01 407290 3e-56
RSS1972 A01 3002757 2e-90
RSS1979 A01 1906301 1e-103
RSS1980 A01 26487177 9e-65
RSS1981 A01 10927001 5e-24
RSS2001 A01 7994858 3e-70 LG5 114.0
RSS2003 A01 6552341 1e-107
RSS2004 A01 625360 3e-83
RSS2006 A01 2320218 4e-91
RSS2015 A01 7769267 1e-112
RSS2034 A01 10665854 1e-93
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus