Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2239 A01 4059000 2e-98
RSS1415 A01 4080015 6e-81
RSS1015 A01 4085998 1e-63
RSS2050 A01 4172345 2e-91
RSS2152 A01 4174468 1e-35
RSS0183 A01 4293823 3e-87
RSS3227 A01 4322680 1e-122
RSS0571 A01 4384045 2e-94
RSS1473 A01 4458740 2e-90
RSS2599 A01 4538904 1e-120
RSS0158 A01 4668549 1e-122
RSS3323 A01 4749134 7e-57
RSS2729 A01 4889295 1e-144
RSS1424 A01 4927140 1e-112
RSS0277 A01 4927701 1e-123
RSS2784 A01 5087578 1e-108
RSS4027 A01 5094872 1e-96
RSS0388 A01 5253308 1e-103
RSS3156 A01 5280903 4e-10
RSS1227 A01 5301692 2e-90
RSS3439 A01 5458394 2e-75
RSS2952 A01 5490691 3e-47
RSS2493 A01 5518444 2e-54
RSS3995 A01 5519957 1e-145
RSS1154 A01 5760842 9e-74
RSS2339 A01 5809103 2e-48
RSS3948 A01 5825948 3e-91
RSS0995 A01 5905290 4e-11
RSS2907 A01 5936472 1e-93
RSS1895 A01 6001868 1e-121
RSS1439 A01 6088183 1e-120
RSS3909 A01 6138722 4e-59
RSS2464 A01 6148836 2e-89
RSS1751 A01 6195349 7e-46
RSS3327 A01 6291931 3e-80
RSS0018 A01 6339211 4e-78
RSS3960 A01 6436364 1e-110
RSS2003 A01 6552341 1e-107
RSS1131 A01 6588113 3e-83
RSS2299 A01 6589545 1e-108
RSS0877 A01 6605891 1e-119
RSS0122 A01 6629206 1e-99
RSS0459 A01 6748104 5e-87
RSS3977 A01 6831146 7e-57
RSS2116 A01 6869906 1e-75
RSS1009 A01 7033378 1e-90
RSS0943 A01 7365899 1e-149
RSS3717 A01 7455895 5e-82
RSS3241 A01 7472333 6e-64
RSS2391 A01 7511784 1e-117
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus