Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS2391 A01 7511784 1e-117
RSS2139 A01 7524021 1e-120
RSS1776 A01 7524432 1e-116
RSS1741 A01 7696453 1e-104
RSS0065 A01 7723253 3e-43
RSS2503 A01 7736826 2e-74 LG5 134.6
RSS1701 A01 7765711 4e-95
RSS2015 A01 7769267 1e-112
RSS2142 A01 7836773 2e-79
RSS1087 A01 7931087 1e-108
RSS2304 A01 7941850 9e-96
RSS1452 A01 7964063 1e-118
RSS3312 A01 7966089 4e-82
RSS2001 A01 7994858 3e-70 LG5 114.0
RSS1170 A01 8011899 4e-91 LG5 114.4
RSS1543 A01 8019726 8e-76
RSS0702 A01 8027641 2e-77
RSS0761 A01 8129507 2e-70
RSS2990 A01 8161198 1e-56
RSS3379 A01 8175497 7e-78
RSS2722 A01 8175497 1e-54
RSS1660 A01 8225131 7e-14 LG6 56.0
RSS1620 A01 8397366 1e-113
RSS1793 A01 8404832 2e-63
RSS2752 A01 8412351 8e-97 LG5 116.3
RSS1779 A01 8425291 1e-113
RSS2898 A01 8439710 6e-89 LG5 116.1
RSS0314 A01 8526118 1e-106
RSS2982 A01 8547781 6e-65
RSS3094 A01 8639111 1e-106 LG5 117.0
RSS2292 A01 8647399 1e-108
RSS2338 A01 8673507 1e-101
RSS0140 A01 9024903 5e-19 LG6 118.2
RSS2446 A01 9086070 7e-98
RSS2966 A01 9179435 2e-91
RSS3811 A01 9276541 3e-74
RSS0646 A01 9366965 4e-78
RSS1762 A01 9367772 1e-124
RSS2264 A01 9687363 1e-110
RSS1446 A01 9803391 7e-71
RSS3302 A01 9863209 4e-73
RSS2158 A01 9892895 1e-122
RSS2114 A01 9952402 3e-91 LG5 119.6
RSS3337 A01 9953457 8e-40
RSS1876 A01 10039415 3e-24
RSS3699 A01 10107114 4e-79
RSS1886 A01 10137522 5e-77
RSS2492 A01 10140034 4e-93
RSS1632 A01 10241347 1e-91
RSS0305 A01 10258937 1e-05 LG7 48.3
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus