Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS1078 A01 21325717 5e-46
RSS1087 A01 7931087 1e-108
RSS1109 A01 24241638 5e-71
RSS1123 A01 1234348 5e-95
RSS1131 A01 6588113 3e-83
RSS1136 A01 608775 1e-115
RSS1140 A01 13189282 9e-81 LG5 39.1
RSS1141 A01 1768132 1e-101 LG5 129.4
RSS1143 A01 25583534 1e-63
RSS1152 A01 7280145 5e-95 LG5 111.5
RSS1154 A01 5760842 9e-74
RSS1170 A01 8011899 4e-91 LG5 114.4
RSS1179 A01 18092975 3e-19
RSS1227 A01 5301692 2e-90
RSS1267 A01 1692991 2e-50
RSS1269 A01 11040296 2e-57
RSS1271 A01 18189581 6e-30
RSS1274 A01 21400744 6e-78
RSS1282 A01 775917 1e-112
RSS1285 A01 12783230 1e-127
RSS1287 A01 24325585 1e-118
RSS1294 A01 28376281 3e-89
RSS1298 A01 27804246 1e-06
RSS1306 A01 25874911 2e-28
RSS1318 A01 26647105 1e-111
RSS1367 A01 20202850 1e-102 LG2 20.3
RSS1373 A01 20526203 4e-07
RSS1374 A01 405943 1e-83 LG5 134.4
RSS1409 A01 2707812 1e-101
RSS1410 A01 3080344 1e-103
RSS1415 A01 4080015 6e-81
RSS1424 A01 4927140 1e-112
RSS1433 A01 10581919 2e-96 LG7 69.0
RSS1439 A01 6088183 1e-120
RSS1442 A01 945533 1e-116 LG5 131.8
RSS1446 A01 9803391 7e-71
RSS1452 A01 7964063 1e-118
RSS1462 A01 10954316 6e-57
RSS1473 A01 4458740 2e-90
RSS1475 A01 26908829 1e-115 LG6 91.1
RSS1486 A01 77512 1e-105
RSS1500 A01 6553095 1e-117 LG5 110.2
RSS1501 A01 25271493 2e-31 LG2 5.0
RSS1504 A01 14909207 5e-97
RSS1511 A01 18149228 1e-120
RSS1521 A01 27962188 6e-87
RSS1529 A01 11482770 2e-45
RSS1543 A01 8019726 8e-76
RSS1548 A01 14960373 7e-94
RSS1593 A01 21331233 2e-79
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus