Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)		 Evalue GHRI
Name Position* Linkage Position
RSS0351 A01 952666 5e-98
RSS2401 A01 993885 3e-95
RSS3582 A01 1058398 4e-78
RSS1123 A01 1234348 5e-95
RSS3346 A01 1234354 2e-60
RSS2804 A01 1386884 1e-117
RSS0199 A01 1441805 8e-82
RSS0505 A01 1477529 1e-90
RSS2932 A01 1495467 1e-114
RSS0690 A01 1579247 1e-59
RSS1267 A01 1692991 2e-50
RSS2576 A01 1740604 7e-85
RSS3660 A01 1840438 6e-67
RSS1979 A01 1906301 1e-103
RSS0415 A01 1988932 2e-62
RSS3992 A01 2056555 5e-69
RSS2314 A01 2094468 3e-47
RSS0054 A01 2137272 3e-76
RSS0978 A01 2245652 5e-71
RSS2006 A01 2320218 4e-91
RSS3019 A01 2402898 8e-77
RSS3559 A01 2473802 2e-64
RSS2956 A01 2474856 1e-35
RSS0319 A01 2561119 3e-68
RSS0605 A01 2566548 3e-97
RSS0568 A01 2707445 2e-89
RSS1409 A01 2707812 1e-101
RSS0308 A01 2779853 5e-96
RSS3314 A01 2831863 9e-60
RSS0791 A01 2882420 4e-65
RSS3866 A01 2888235 3e-78
RSS3885 A01 2951997 1e-69
RSS3659 A01 3000289 4e-94
RSS1972 A01 3002757 2e-90
RSS3183 A01 3023943 2e-09
RSS1410 A01 3080344 1e-103
RSS0215 A01 3124780 6e-84
RSS3841 A01 3126843 3e-64
RSS3690 A01 3138600 1e-115
RSS0971 A01 3183129 3e-66
RSS0197 A01 3187275 8e-70
RSS1859 A01 3222555 1e-78
RSS3842 A01 3295345 1e-48
RSS3487 A01 3323777 2e-25
RSS2443 A01 3544948 1e-108
RSS0480 A01 3713085 1e-127
RSS2903 A01 3732300 1e-65
RSS3068 A01 3732300 4e-81
RSS3185 A01 3815977 1e-91
RSS3891 A01 3938740 6e-79
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407

MarkerDB | Raphanus sativus