Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0612 A01 11230788 1e-115
RSS0613 A01 27328538 3e-90
RSS0619 A01 10329126 1e-107
RSS0620 A01 21384655 1e-45
RSS0644 A01 27450105 2e-73
RSS0645 A01 672510 1e-29 LG5 111.5
RSS0646 A01 9366965 4e-78
RSS0654 A01 12693111 1e-43 LG2 84.7
RSS0659 A01 19001306 1e-114
RSS0689 A01 14449133 4e-90
RSS0690 A01 1579247 1e-59
RSS0702 A01 8027641 2e-77
RSS0715 A01 6194720 3e-63 LG5 109.8
RSS0721 A01 14091508 5e-21
RSS0739 A01 23297756 3e-87
RSS0742 A01 26762004 2e-74
RSS0761 A01 8129507 2e-70
RSS0768 A01 20267845 1e-120 LG2 22.1
RSS0791 A01 2882420 4e-65
RSS0795 A01 11099410 1e-109
RSS0802 A01 4276637 2e-74 LG5 121.2
RSS0806 A01 16446391 6e-24
RSS0818 A01 28048488 2e-22 LG2 6.1
RSS0845 A01 316669 1e-108 LG5 134.4
RSS0858 A01 4874004 3e-72 LG4 123.7
RSS0864 A01 27804750 6e-56 LG2 7.3
RSS0877 A01 6605891 1e-119
RSS0880 A01 10449182 1e-40
RSS0895 A01 21256938 1e-126 LG2 19.3
RSS0895_a A01 21256938 1e-126 LG2 37.6
RSS0898 A01 938235 1e-102
RSS0905 A01 23886899 1e-120
RSS0921 A01 18813598 3e-95
RSS0922 A01 18374756 1e-142 LG3 136.0
RSS0928 A01 28418669 1e-126
RSS0937 A01 20428097 1e-139
RSS0943 A01 7365899 1e-149
RSS0945 A01 11485431 1e-106
RSS0955 A01 18046262 2e-76
RSS0957 A01 3156578 1e-113 LG5 125.6
RSS0971 A01 3183129 3e-66
RSS0972 A01 24546009 1e-115
RSS0978 A01 2245652 5e-71
RSS0995 A01 5905290 4e-11
RSS1009 A01 7033378 1e-90
RSS1015 A01 4085998 1e-63
RSS1036 A01 21292294 2e-61
RSS1043 A01 22843265 1e-110
RSS1048 A01 17333570 3e-64
RSS1077 A01 11809604 1e-131
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus