Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS2898 A01 8439710 6e-89 LG5 116.1
RSS2752 A01 8412351 8e-97 LG5 116.3
RSS3094 A01 8639111 1e-106 LG5 117.0
RSS2114 A01 9952402 3e-91 LG5 119.6
RSS3702 A01 4328879 4e-91 LG5 121.0
RSS0802 A01 4276637 2e-74 LG5 121.2
RSS3805 A01 3433659 8e-12 LG5 124.4
RSS2483 A01 3241219 5e-09 LG5 125.0
RSS0957 A01 3156578 1e-113 LG5 125.6
RSS3566 A01 3083641 8e-79 LG5 126.6
RSS1796 A01 2087003 3e-44 LG5 128.1
RSS2508 A01 1740499 1e-100 LG5 129.3
RSS1141 A01 1768132 1e-101 LG5 129.4
RSS1640 A01 1286086 1e-83 LG5 130.6
RSS1442 A01 945533 1e-116 LG5 131.8
RSS0845 A01 316669 1e-108 LG5 134.4
RSS1374 A01 405943 1e-83 LG5 134.4
RSS1595 A01 279807 3e-80 LG5 134.5
RSS3053 A01 332310 1e-122 LG5 134.6
RSS3449 A01 609179 1e-116 LG5 134.6
RSS2503 A01 7736826 2e-74 LG5 134.6
RSS3197 A01 3056725 5e-61 LG5 147.5
RSS1660 A01 8225131 7e-14 LG6 56.0
RSS2661 A01 19000749 1e-109 LG6 59.7
RSS1475 A01 26908829 1e-115 LG6 91.1
RSS0140 A01 9024903 5e-19 LG6 118.2
RSS0305 A01 10258937 1e-05 LG7 48.3
RSS0294 A01 5718492 1e-122 LG7 63.9
RSS4002 A01 10480217 1e-119 LG7 69.0
RSS1433 A01 10581919 2e-96 LG7 69.0
RSS1486 A01 77512 1e-105
RSS3418 A01 120901 2e-97
RSS2805 A01 121719 1e-12
RSS2715 A01 141635 1e-64
RSS1935 A01 407290 3e-56
RSS2557 A01 437939 1e-114
RSS1688 A01 562727 2e-31
RSS2176 A01 594279 7e-35
RSS1136 A01 608775 1e-115
RSS3046 A01 608799 1e-72
RSS2004 A01 625360 3e-83
RSS3728 A01 766758 1e-82
RSS2228 A01 767092 1e-105
RSS1282 A01 775917 1e-112
RSS3935 A01 828439 9e-80
RSS0558 A01 835662 4e-86
RSS0336 A01 866304 3e-89
RSS2860 A01 872168 1e-107
RSS2086 A01 899789 1e-88
RSS0898 A01 938235 1e-102
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus