Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS0054 A01 2137272 3e-76
RSS0978 A01 2245652 5e-71
RSS2006 A01 2320218 4e-91
RSS3019 A01 2402898 8e-77
RSS3559 A01 2473802 2e-64
RSS2956 A01 2474856 1e-35
RSS0319 A01 2561119 3e-68
RSS0605 A01 2566548 3e-97
RSS0568 A01 2707445 2e-89
RSS1409 A01 2707812 1e-101
RSS0308 A01 2779853 5e-96
RSS3314 A01 2831863 9e-60
RSS0791 A01 2882420 4e-65
RSS3866 A01 2888235 3e-78
RSS3885 A01 2951997 1e-69
RSS3659 A01 3000289 4e-94
RSS1972 A01 3002757 2e-90
RSS3183 A01 3023943 2e-09
RSS3197 A01 3056725 5e-61 LG5 147.5
RSS1410 A01 3080344 1e-103
RSS3566 A01 3083641 8e-79 LG5 126.6
RSS0215 A01 3124780 6e-84
RSS3841 A01 3126843 3e-64
RSS3690 A01 3138600 1e-115
RSS0957 A01 3156578 1e-113 LG5 125.6
RSS0971 A01 3183129 3e-66
RSS0197 A01 3187275 8e-70
RSS1859 A01 3222555 1e-78
RSS2483 A01 3241219 5e-09 LG5 125.0
RSS3842 A01 3295345 1e-48
RSS3487 A01 3323777 2e-25
RSS3805 A01 3433659 8e-12 LG5 124.4
RSS2443 A01 3544948 1e-108
RSS0480 A01 3713085 1e-127
RSS2903 A01 3732300 1e-65
RSS3068 A01 3732300 4e-81
RSS3185 A01 3815977 1e-91
RSS3891 A01 3938740 6e-79
RSS2239 A01 4059000 2e-98
RSS1415 A01 4080015 6e-81
RSS1015 A01 4085998 1e-63
RSS3589 A01 4172345 2e-68 LG2 63.2
RSS2050 A01 4172345 2e-91
RSS2152 A01 4174468 1e-35
RSS0802 A01 4276637 2e-74 LG5 121.2
RSS0183 A01 4293823 3e-87
RSS3227 A01 4322680 1e-122
RSS3702 A01 4328879 4e-91 LG5 121.0
RSS0571 A01 4384045 2e-94
RSS1473 A01 4458740 2e-90
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus