Radish Marker Database

B. rapa genome (v1.2) list : A01

Order of Daikon markers and B. rapa gene models

Daikon markers on the B. rapa genome (v1.2)

Total Entries: 407


Marker Color EST-SNP EST-SSR Genome-SSR Intron-SNP

Marker Name Genome
(B. rapa v1.2)
Evalue GHRI
Name Position* Linkage Position
RSS1486 A01 77512 1e-105
RSS3418 A01 120901 2e-97
RSS2805 A01 121719 1e-12
RSS2715 A01 141635 1e-64
RSS1595 A01 279807 3e-80 LG5 134.5
RSS0845 A01 316669 1e-108 LG5 134.4
RSS3053 A01 332310 1e-122 LG5 134.6
RSS3530_a A01 338368 3e-14 LG5 38.2
RSS1374 A01 405943 1e-83 LG5 134.4
RSS1935 A01 407290 3e-56
RSS2557 A01 437939 1e-114
RSS1688 A01 562727 2e-31
RSS2176 A01 594279 7e-35
RSS1136 A01 608775 1e-115
RSS3046 A01 608799 1e-72
RSS3449 A01 609179 1e-116 LG5 134.6
RSS2004 A01 625360 3e-83
RSS0645 A01 672510 1e-29 LG5 111.5
RSS2678 A01 673206 9e-18 LG5 111.5
RSS3728 A01 766758 1e-82
RSS2228 A01 767092 1e-105
RSS1282 A01 775917 1e-112
RSS3935 A01 828439 9e-80
RSS0558 A01 835662 4e-86
RSS0336 A01 866304 3e-89
RSS2860 A01 872168 1e-107
RSS2086 A01 899789 1e-88
RSS0898 A01 938235 1e-102
RSS1442 A01 945533 1e-116 LG5 131.8
RSS0351 A01 952666 5e-98
RSS2401 A01 993885 3e-95
RSS3582 A01 1058398 4e-78
RSS1123 A01 1234348 5e-95
RSS3346 A01 1234354 2e-60
RSS1640 A01 1286086 1e-83 LG5 130.6
RSS2804 A01 1386884 1e-117
RSS0199 A01 1441805 8e-82
RSS0505 A01 1477529 1e-90
RSS2932 A01 1495467 1e-114
RSS0690 A01 1579247 1e-59
RSS1267 A01 1692991 2e-50
RSS2508 A01 1740499 1e-100 LG5 129.3
RSS2576 A01 1740604 7e-85
RSS1141 A01 1768132 1e-101 LG5 129.4
RSS3660 A01 1840438 6e-67
RSS1979 A01 1906301 1e-103
RSS0415 A01 1988932 2e-62
RSS3992 A01 2056555 5e-69
RSS1796 A01 2087003 3e-44 LG5 128.1
RSS2314 A01 2094468 3e-47
* Best match positions of the marker sequences to the genome databases using tblastx (<1e-20) without filtering query sequence.

Total Entries: 407


MarkerDB | Raphanus sativus